Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.95□□□□□ -1.78
COL20A1Q9P218 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL20A1Q9P218 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.95□□□□□ -1.78
COL20A1Q9P218 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL20A1Q9P218 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL20A1Q9P218 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.95□□□□□ -1.78
COL20A1Q9P218 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL20A1Q9P218 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL20A1Q9P218 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL20A1Q9P218 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL20A1Q9P218 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL20A1Q9P218 RNU6-50P-201ENST00000362356 103 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 RNU6-179P-201ENST00000363350 107 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.94□□□□□ -1.78
COL20A1Q9P218 MIR491-201ENST00000384877 84 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 RNU6-780P-201ENST00000391030 104 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.94□□□□□ -1.78
COL20A1Q9P218 ZNF90P2-204ENST00000419323 1075 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.94□□□□□ -1.78
COL20A1Q9P218 AL356867.1-201ENST00000429623 299 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.94□□□□□ -1.78
COL20A1Q9P218 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.94□□□□□ -1.78
COL20A1Q9P218 MTATP6P16-201ENST00000434543 526 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 AC005019.1-201ENST00000436455 431 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 AL138799.3-201ENST00000438968 350 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.94□□□□□ -1.78
COL20A1Q9P218 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.94□□□□□ -1.78
COL20A1Q9P218 AC020550.1-201ENST00000447385 163 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 ANP32BP2-201ENST00000454525 545 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 RNU7-182P-201ENST00000459009 62 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 RPL31P58-201ENST00000469001 379 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 AC092989.1-201ENST00000481235 277 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.94□□□□□ -1.78
COL20A1Q9P218 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.94□□□□□ -1.78
COL20A1Q9P218 AC105417.1-201ENST00000514691 285 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 RN7SKP258-201ENST00000517151 304 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL20A1Q9P218 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL20A1Q9P218 AL360157.1-201ENST00000565962 87 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.94□□□□□ -1.78
COL20A1Q9P218 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.94□□□□□ -1.78
COL20A1Q9P218 AC174048.1-201ENST00000603389 144 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.94□□□□□ -1.78
COL20A1Q9P218 uc_338.11-201ENST00000619132 160 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 AL589994.2-201ENST00000621124 579 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 FAM35DP-201ENST00000323387 2712 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
COL20A1Q9P218 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL20A1Q9P218 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.94□□□□□ -1.78
COL20A1Q9P218 AC093536.2-201ENST00000565257 1406 ntBASIC3.94□□□□□ -1.78
COL20A1Q9P218 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL20A1Q9P218 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL20A1Q9P218 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.93□□□□□ -1.78
COL20A1Q9P218 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.93□□□□□ -1.78
COL20A1Q9P218 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL20A1Q9P218 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL20A1Q9P218 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL20A1Q9P218 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
COL20A1Q9P218 RNU6-483P-201ENST00000384088 108 ntBASIC3.93□□□□□ -1.78
COL20A1Q9P218 RNU6-387P-201ENST00000411331 105 ntBASIC3.93□□□□□ -1.78
COL20A1Q9P218 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.93□□□□□ -1.78
COL20A1Q9P218 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL20A1Q9P218 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.93□□□□□ -1.78
COL20A1Q9P218 AL606489.2-201ENST00000433886 234 ntBASIC3.93□□□□□ -1.78
COL20A1Q9P218 RPS15AP9-201ENST00000439856 381 ntBASIC3.93□□□□□ -1.78
COL20A1Q9P218 RPS3AP12-201ENST00000443616 753 ntBASIC3.93□□□□□ -1.78
COL20A1Q9P218 AC115115.1-201ENST00000449927 248 ntBASIC3.93□□□□□ -1.78
COL20A1Q9P218 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.93□□□□□ -1.78
COL20A1Q9P218 RN7SL601P-201ENST00000471221 293 ntBASIC3.93□□□□□ -1.78
COL20A1Q9P218 VN1R17P-201ENST00000472048 1090 ntBASIC3.93□□□□□ -1.78
COL20A1Q9P218 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.93□□□□□ -1.78
COL20A1Q9P218 RPL21P13-201ENST00000488305 481 ntBASIC3.93□□□□□ -1.78
COL20A1Q9P218 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
COL20A1Q9P218 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.93□□□□□ -1.78
COL20A1Q9P218 RNA5SP468-201ENST00000516782 93 ntBASIC3.93□□□□□ -1.78
COL20A1Q9P218 Y_RNA.704-201ENST00000516851 102 ntBASIC3.93□□□□□ -1.78
COL20A1Q9P218 MIR5195-201ENST00000583555 115 ntBASIC3.93□□□□□ -1.78
COL20A1Q9P218 AC020914.4-201ENST00000597690 277 ntBASIC3.93□□□□□ -1.78
COL20A1Q9P218 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.93□□□□□ -1.78
COL20A1Q9P218 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.93□□□□□ -1.78
COL20A1Q9P218 AL713922.2-201ENST00000619384 716 ntBASIC3.93□□□□□ -1.78
COL20A1Q9P218 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.93□□□□□ -1.78
COL20A1Q9P218 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.93□□□□□ -1.78
COL20A1Q9P218 U6.114-201ENST00000636407 96 ntBASIC3.93□□□□□ -1.78
COL20A1Q9P218 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL20A1Q9P218 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL20A1Q9P218 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
COL20A1Q9P218 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
COL20A1Q9P218 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL20A1Q9P218 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL20A1Q9P218 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.92□□□□□ -1.78
COL20A1Q9P218 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
COL20A1Q9P218 RNA5SP197-201ENST00000363357 119 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 RNU6-188P-201ENST00000364207 107 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 Y_RNA.256-201ENST00000364594 104 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 RNU6-701P-201ENST00000384059 107 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 MIR514A1-201ENST00000385133 98 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 RNU6-1158P-201ENST00000391167 107 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 RN7SKP140-201ENST00000411196 284 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms