Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
HOXC10Q9NYD6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
HOXC10Q9NYD6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
HOXC10Q9NYD6 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
HOXC10Q9NYD6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
HOXC10Q9NYD6 DDX43P2-201ENST00000604753 1354 ntBASIC2.73□□□□□ -1.97
HOXC10Q9NYD6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 AC080100.1-201ENST00000624239 5356 ntBASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 FRG1BP-201ENST00000278882 761 ntBASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 RNU6-359P-201ENST00000365466 108 ntBASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 SNORA6-201ENST00000384033 151 ntBASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 RNU1-52P-201ENST00000384190 164 ntBASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 BTF3P7-201ENST00000407097 488 ntBASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 MTCO3P30-201ENST00000426425 670 ntBASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 MTND2P39-201ENST00000457230 764 ntBASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 MTCYBP17-201ENST00000503579 789 ntBASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 AC092436.1-201ENST00000506450 503 ntBASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 MRPS36P2-201ENST00000512569 299 ntBASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 RNU6-798P-201ENST00000516912 103 ntBASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 AC007115.1-201ENST00000546853 234 ntBASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 MIR5007-201ENST00000583098 95 ntBASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 MIR4658-201ENST00000584344 65 ntBASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 AC009902.3-201ENST00000606235 2172 ntBASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 AC135507.1-201ENST00000607214 561 ntBASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 AL133445.2-201ENST00000611191 527 ntBASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 MIR6130-201ENST00000619419 109 ntBASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 AC011330.2-201ENST00000621680 635 ntBASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.72□□□□□ -1.97
HOXC10Q9NYD6 AL139276.1-201ENST00000311910 1001 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 RPL21P132-201ENST00000331267 462 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 RNU4-92P-201ENST00000363783 136 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 RNU2-43P-201ENST00000410306 190 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 RNU4-22P-201ENST00000411058 166 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 AC024082.2-201ENST00000434771 238 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 Z80107.1-201ENST00000436830 412 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 EEF1A1P39-201ENST00000440791 250 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 AC009237.8-201ENST00000445492 379 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 COX6CP12-201ENST00000446748 202 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 ZNF886P-201ENST00000450781 723 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 RNU7-136P-201ENST00000458819 69 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 AC023424.2-201ENST00000493479 777 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 AC134050.1-201ENST00000495088 933 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 DEFB131D-201ENST00000526803 184 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 AC090615.1-201ENST00000577519 154 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 AL353997.4-201ENST00000586196 166 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 AC004987.4-201ENST00000603383 338 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 AC067747.1-201ENST00000608026 250 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 AC107075.1-201ENST00000613695 314 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 MTND5P6-201ENST00000422338 1798 ntBASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.71□□□□□ -1.98
HOXC10Q9NYD6 AC099786.3-201ENST00000565735 1410 ntBASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 AC096638.1-201ENST00000444678 216 ntBASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 EXOSC3P1-201ENST00000448649 500 ntBASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 SNORD121B-201ENST00000458838 81 ntBASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 EIF4EP3-201ENST00000498782 656 ntBASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 XKRY-201ENST00000510392 1100 ntBASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 HMGB3P3-201ENST00000510526 400 ntBASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 RNU6-237P-201ENST00000515985 71 ntBASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 AC023824.2-201ENST00000566185 400 ntBASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 AC105224.1-201ENST00000587055 421 ntBASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 AP001269.3-201ENST00000588718 329 ntBASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 RPP40P2-201ENST00000603596 712 ntBASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 AL139022.2-201ENST00000606934 443 ntBASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 AL121652.1-201ENST00000608851 448 ntBASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 AC104237.2-201ENST00000612456 443 ntBASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 MIR6895-201ENST00000613497 78 ntBASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 AC002550.2-201ENST00000621246 394 ntBASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 CU459211.1-201ENST00000635667 749 ntBASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 AC099654.9-201ENST00000637055 678 ntBASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
HOXC10Q9NYD6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 RNU6-28P-201ENST00000362378 107 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms