Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 AC174048.1-201ENST00000603389 144 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 AC104763.2-201ENST00000604179 382 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 AC008962.1-201ENST00000605729 304 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 AL121992.2-201ENST00000606262 256 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 AL365204.3-201ENST00000612448 685 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 MIR6076-201ENST00000617521 113 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 TPTE2P4-201ENST00000258589 1605 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 RIOK3P1-201ENST00000418778 1528 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 AL049641.1-201ENST00000441055 1948 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 Y_RNA.3-201ENST00000362331 103 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 MIR325-201ENST00000385260 98 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 AL139397.2-201ENST00000404529 772 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 RNU6ATAC-201ENST00000408749 126 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 AC007919.1-201ENST00000429380 217 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 RPL23AP69-201ENST00000431134 458 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 AL512844.2-201ENST00000433990 593 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 AC007389.2-201ENST00000434630 306 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 AC002486.1-201ENST00000435098 391 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 PIGFP3-201ENST00000441918 722 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 AL590664.1-201ENST00000448065 339 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 RNU6-953P-201ENST00000459154 107 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 RPL23AP14-201ENST00000468281 468 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 AC126389.1-201ENST00000477436 290 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 AL135752.1-201ENST00000479477 471 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 AL160314.1-201ENST00000490836 438 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 HSPD1P15-201ENST00000505573 1122 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 RNU6-1282P-201ENST00000516735 96 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 MTCYBP20-201ENST00000524239 1129 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 AC068790.6-201ENST00000602558 258 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 AC146944.4-201ENST00000602697 718 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 AL391646.1-201ENST00000603860 190 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 OR5H6-203ENST00000642105 978 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 ZNF826P-207ENST00000622273 1910 ntBASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SLC6A13Q9NSD5 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
SLC6A13Q9NSD5 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.28□□□□□ -1.89
SLC6A13Q9NSD5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 RPL7P26-201ENST00000333817 754 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 Y_RNA.1-201ENST00000352915 104 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 Y_RNA.159-201ENST00000363674 87 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 Y_RNA.505-201ENST00000384489 102 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 MIR1-2-201ENST00000384961 85 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 RNA5SP171-201ENST00000391071 115 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 PTMAP2-201ENST00000397627 327 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 RNA5SP31-201ENST00000411144 127 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 ATP5A1P2-201ENST00000412323 255 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 MTATP6P18-201ENST00000417994 673 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 MTCO2P19-201ENST00000427513 598 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 MTATP6P16-201ENST00000434543 526 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 BNIP3P2-201ENST00000441221 577 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 PRDX3P3-201ENST00000447765 522 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 RPL37P6-201ENST00000460682 294 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 KC877373.1-201ENST00000479066 408 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 RPL32P34-201ENST00000486380 400 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 AC116562.3-201ENST00000506136 177 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 SNORD27.1-201ENST00000516319 72 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 SNORA70.19-201ENST00000516717 90 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 RNU6-677P-201ENST00000516914 101 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 AC093331.1-201ENST00000521474 169 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 AC068587.5-201ENST00000528506 175 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 AL359212.1-201ENST00000556608 614 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 Z84480.1-201ENST00000605131 311 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms