Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC034105.3-201ENST00000565294 442 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 CYCSP39-201ENST00000565821 309 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 EIF1P4-201ENST00000572664 335 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 MIR3146-201ENST00000580367 79 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 MIR4298-201ENST00000584380 73 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.57□□□□□ -1.84
DDX4Q9NQI0 KC877982.1-201ENST00000602313 470 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AC080078.2-201ENST00000603766 501 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AC006023.1-201ENST00000603944 259 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AC007038.2-201ENST00000608095 740 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AC091304.9-201ENST00000612091 226 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AC005332.10-201ENST00000612725 619 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AC091834.1-201ENST00000614543 472 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AC112204.3-201ENST00000623822 332 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AC092326.2-201ENST00000624772 1561 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 SNORA50A-202ENST00000629536 136 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
DDX4Q9NQI0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.57□□□□□ -1.84
DDX4Q9NQI0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.57□□□□□ -1.84
DDX4Q9NQI0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
DDX4Q9NQI0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
DDX4Q9NQI0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
DDX4Q9NQI0 U8.3-201ENST00000363321 132 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 RNY4P34-201ENST00000364779 95 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.56□□□□□ -1.84
DDX4Q9NQI0 RNU6-1074P-201ENST00000383995 104 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 RNU6-432P-201ENST00000384196 109 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 RNU6-754P-201ENST00000391166 107 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 UBE2V1P2-201ENST00000397758 440 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 AL354719.1-201ENST00000406535 843 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 RNU4-65P-201ENST00000410473 140 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 RNU2-62P-201ENST00000410868 191 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.56□□□□□ -1.84
DDX4Q9NQI0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX4Q9NQI0 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX4Q9NQI0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX4Q9NQI0 AC022018.1-201ENST00000430685 241 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX4Q9NQI0 FTH1P1-201ENST00000437933 532 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 HIGD1AP11-201ENST00000438361 280 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 AC093156.1-201ENST00000440382 670 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX4Q9NQI0 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
DDX4Q9NQI0 AC114967.1-201ENST00000504890 259 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 MTND2P33-201ENST00000506452 1031 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX4Q9NQI0 RN7SKP60-201ENST00000516985 239 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 RNU2-46P-201ENST00000517038 113 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 AP000857.1-201ENST00000532151 543 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 OR4T1P-201ENST00000554933 911 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 GTF3AP2-201ENST00000557014 266 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.56□□□□□ -1.84
DDX4Q9NQI0 AL390240.1-201ENST00000612950 384 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 AL603758.1-201ENST00000618654 241 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 AC007998.5-201ENST00000622938 237 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.56□□□□□ -1.84
DDX4Q9NQI0 AC110994.2-201ENST00000635481 492 ntBASIC3.56□□□□□ -1.84
DDX4Q9NQI0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.56□□□□□ -1.84
DDX4Q9NQI0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
DDX4Q9NQI0 AL355596.1-201ENST00000565399 3996 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.55□□□□□ -1.84
DDX4Q9NQI0 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
DDX4Q9NQI0 MIR135A2-201ENST00000384854 100 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 MIR184-201ENST00000384962 84 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 RNU6-882P-201ENST00000391025 103 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 RPL23AP32-201ENST00000395315 459 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 CCNG1P1-201ENST00000406783 885 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 AL589872.1-201ENST00000426602 288 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 AC137499.1-201ENST00000427602 88 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 OR4K11P-201ENST00000431829 904 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX4Q9NQI0 TIMM9P1-201ENST00000436122 256 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 AL136380.1-201ENST00000447970 162 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 AC096751.1-202ENST00000502691 1067 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 KCTD9P5-201ENST00000504141 1170 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 VN1R104P-201ENST00000505115 1009 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
DDX4Q9NQI0 HIGD1AP13-201ENST00000509878 289 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX4Q9NQI0 RNU6-430P-201ENST00000517078 107 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.55□□□□□ -1.84
DDX4Q9NQI0 AC104027.1-201ENST00000521887 300 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 AP003033.1-201ENST00000527244 415 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 AP003181.2-201ENST00000528941 181 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.55□□□□□ -1.84
DDX4Q9NQI0 AC022880.1-201ENST00000534017 973 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.55□□□□□ -1.84
DDX4Q9NQI0 AC245505.1-201ENST00000556398 224 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.55□□□□□ -1.84
DDX4Q9NQI0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.55□□□□□ -1.84
DDX4Q9NQI0 OR4K8P-201ENST00000578842 1048 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.55□□□□□ -1.84
DDX4Q9NQI0 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.55□□□□□ -1.84
DDX4Q9NQI0 AC245014.2-201ENST00000603689 287 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 AC246785.4-201ENST00000605374 287 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 RMST_8.1-201ENST00000610287 165 ntBASIC3.55□□□□□ -1.84
DDX4Q9NQI0 AC093838.1-201ENST00000613014 469 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms