Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 AC112198.2-201ENST00000426589 6996 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 Y_RNA.33-201ENST00000362591 102 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 Y_RNA.199-201ENST00000364014 102 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 U3.13-201ENST00000364804 214 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 Y_RNA.405-201ENST00000383979 100 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 RNU6-629P-201ENST00000384061 103 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 Y_RNA.451-201ENST00000384200 100 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 Y_RNA.524-201ENST00000384564 100 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 Y_RNA.561-201ENST00000384694 100 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 SNORA12.2-201ENST00000391040 156 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 AL079342.1-201ENST00000401460 267 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 AL117339.3-201ENST00000418733 162 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 MTCO1P39-201ENST00000426148 480 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 CFL1P1-202ENST00000432948 411 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 AC093414.1-201ENST00000434712 514 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 ISCUP1-201ENST00000454451 448 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 RPS29P27-201ENST00000463711 170 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 AC231760.1-201ENST00000498002 260 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 AC087441.2-201ENST00000529141 262 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 AC073869.10-201ENST00000642016 354 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 AC090740.1-201ENST00000623193 2262 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 AC004925.1-201ENST00000624256 2706 ntBASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEUROD4Q9HD90 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 RNA5SP240-201ENST00000365355 128 ntBASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 RNU6-378P-201ENST00000384324 107 ntBASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 Y_RNA.602-201ENST00000410535 92 ntBASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 RNU6-1025P-201ENST00000410629 104 ntBASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 AL513331.1-201ENST00000411908 397 ntBASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 AC017079.2-201ENST00000416102 485 ntBASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 COX6CP10-201ENST00000416832 224 ntBASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 SRSF1P1-201ENST00000424058 520 ntBASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 U8.21-201ENST00000459536 136 ntBASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 RN7SL51P-201ENST00000468230 285 ntBASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 AC034236.1-201ENST00000469891 373 ntBASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 SERF1AP1-201ENST00000514575 187 ntBASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 RNA5SP230-201ENST00000517039 122 ntBASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 AC022868.1-201ENST00000517767 391 ntBASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 AL161798.1-201ENST00000604630 131 ntBASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 AC004852.3-201ENST00000614131 326 ntBASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 MIR6839-201ENST00000620425 113 ntBASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 AC090617.7-201ENST00000623952 126 ntBASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 AC092376.2-201ENST00000622621 4116 ntBASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEUROD4Q9HD90 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NEUROD4Q9HD90 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NEUROD4Q9HD90 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms