Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC026979.1-201ENST00000492525 396 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 HSPD1P15-201ENST00000505573 1122 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 AC117522.1-201ENST00000509821 380 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 RN7SKP122-201ENST00000515923 296 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 RNU6-410P-201ENST00000517006 107 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 AP001646.1-201ENST00000527936 915 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 NCAPGP2-201ENST00000557911 754 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 AC078795.2-201ENST00000602835 1252 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 AL133393.1-201ENST00000603277 287 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 MIR6758-201ENST00000620653 63 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 AC093648.1-201ENST00000623546 606 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 MTND5P26-201ENST00000426018 1752 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 RNU6-1097P-201ENST00000363586 107 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 RNU6-259P-201ENST00000383999 107 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 RNU5A-6P-201ENST00000384136 116 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 RNU6-456P-201ENST00000384493 107 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 MIR1-2-201ENST00000384961 85 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 SAR1AP2-201ENST00000392696 594 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 RPL32P23-201ENST00000397237 405 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 RNA5SP31-201ENST00000411144 127 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 AL807761.1-201ENST00000417622 171 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 RPL23AP82-202ENST00000427528 469 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 RPL36AP6-201ENST00000435770 321 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 AC079781.2-201ENST00000446424 169 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 AL031183.1-201ENST00000457667 207 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 RNU6-953P-201ENST00000459154 107 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 RPL21P8-201ENST00000465083 535 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 RPS3AP17-201ENST00000472594 777 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 AC126389.1-201ENST00000477436 290 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 AC108078.1-201ENST00000508073 725 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 Y_RNA.655-201ENST00000515919 96 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 RN7SKP21-201ENST00000516503 220 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 Y_RNA.689-201ENST00000516589 107 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 SNORD59.2-201ENST00000516873 68 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 AC174048.1-201ENST00000603389 144 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 Z84480.1-201ENST00000605131 311 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 AC004805.2-201ENST00000605382 482 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 AC022893.3-201ENST00000607665 437 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 AC107294.1-201ENST00000609524 467 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 HULC.1-201ENST00000612720 240 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 MIR6875-201ENST00000617506 72 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 AC139792.2-201ENST00000624218 587 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 FAM35BP-202ENST00000497389 3337 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 AC092447.7-201ENST00000422212 1621 ntBASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.03□□□□□ -1.92
CHMP1AQ9HD42 AC022336.2-201ENST00000568966 2538 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 Y_RNA.41-201ENST00000362646 102 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 Y_RNA.159-201ENST00000363674 87 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 RN7SKP226-201ENST00000364912 300 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 RNA5SP283-201ENST00000365604 119 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 RNU6-1042P-201ENST00000384204 107 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 RNU1-13P-201ENST00000384499 162 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 Y_RNA.534-201ENST00000384599 112 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 GSTA9P-201ENST00000406231 611 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 RNA5SP293-201ENST00000410527 113 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AL592045.1-201ENST00000429867 352 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AL591212.2-201ENST00000433923 257 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 SNRPEP9-201ENST00000436794 238 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AL714022.1-201ENST00000439897 151 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 DNAJC19P4-201ENST00000440115 345 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 HSFY6P-201ENST00000445573 403 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms