Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.41□□□□□ -1.86
UPF2Q9HAU5 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
UPF2Q9HAU5 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UPF2Q9HAU5 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
UPF2Q9HAU5 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.4□□□□□ -1.86
UPF2Q9HAU5 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
UPF2Q9HAU5 OR5J1P-201ENST00000313544 939 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 RNU6-853P-201ENST00000364306 107 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 RNU6-1215P-201ENST00000384441 102 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.4□□□□□ -1.87
UPF2Q9HAU5 RPS3AP44-201ENST00000425466 790 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.4□□□□□ -1.87
UPF2Q9HAU5 AL451062.2-201ENST00000427515 271 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 AC009961.2-201ENST00000435771 251 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.4□□□□□ -1.87
UPF2Q9HAU5 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.4□□□□□ -1.87
UPF2Q9HAU5 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.4□□□□□ -1.87
UPF2Q9HAU5 GAPDHP17-201ENST00000449858 1001 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 AL033528.1-201ENST00000453780 140 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 snoU13.4-201ENST00000458916 104 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 AC104563.1-201ENST00000476147 376 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 AP001025.2-201ENST00000490908 477 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 AC008885.1-201ENST00000514930 301 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 SCGB1D5P-201ENST00000515134 247 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 AC009812.2-201ENST00000517657 457 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 AP002453.2-201ENST00000533503 320 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 AC016957.1-201ENST00000534895 309 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 SETP2-201ENST00000553886 926 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.4□□□□□ -1.87
UPF2Q9HAU5 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.4□□□□□ -1.87
UPF2Q9HAU5 XIAPP1-201ENST00000603162 600 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 AC107304.1-201ENST00000604229 296 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 AC004853.1-201ENST00000604902 698 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 AC090578.1-201ENST00000604955 591 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 AL355472.4-201ENST00000610233 626 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.4□□□□□ -1.87
UPF2Q9HAU5 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
UPF2Q9HAU5 AC079597.1-201ENST00000624306 508 ntBASIC3.4□□□□□ -1.87
UPF2Q9HAU5 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
UPF2Q9HAU5 AC096644.4-201ENST00000563417 2912 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 U8.3-201ENST00000363321 132 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 RNA5SP267-201ENST00000364893 126 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 DEFB109C-201ENST00000382575 264 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 DEFB109B-201ENST00000382656 264 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 RNU6-1207P-201ENST00000384343 107 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 RNU6-517P-201ENST00000384362 110 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 AL354719.1-201ENST00000406535 843 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 RNU2-15P-201ENST00000410692 191 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 UBE2V1P10-201ENST00000414685 269 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 AC104332.2-201ENST00000429959 156 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 RPS20P5-201ENST00000434808 360 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 RN7SL601P-201ENST00000471221 293 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 FAM172BP-201ENST00000487497 1089 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 AC117522.3-201ENST00000507974 584 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 AC109464.2-201ENST00000510242 943 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 RNU2-46P-201ENST00000517038 113 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 AP003392.2-201ENST00000527269 208 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 AC123904.2-201ENST00000548059 300 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 RPL21P5-201ENST00000554662 472 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 SNORD84-203ENST00000584275 78 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 BNIP3P8-201ENST00000597863 560 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 AC008277.2-201ENST00000605196 797 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 BX664608.1-201ENST00000610519 487 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 MIR7112-201ENST00000616126 65 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 AC012314.7-201ENST00000619693 93 ntBASIC3.39□□□□□ -1.87
UPF2Q9HAU5 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.39□□□□□ -1.87
UPF2Q9HAU5 AL355596.1-201ENST00000565399 3996 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UPF2Q9HAU5 MTND5P26-201ENST00000426018 1752 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AL161781.1-201ENST00000354277 403 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 RNU4-1-201ENST00000363925 141 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 RNA5SP72-201ENST00000364442 117 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 RN7SKP226-201ENST00000364912 300 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 SNORD51-201ENST00000384320 80 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AL356421.1-201ENST00000403255 413 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 CCNG1P1-201ENST00000406783 885 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AC092447.6-201ENST00000414578 210 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms