Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC7.02□□□□□ -1.28
RNF39Q9H2S5 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.02□□□□□ -1.28
RNF39Q9H2S5 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.02□□□□□ -1.29
RNF39Q9H2S5 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
RNF39Q9H2S5 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
RNF39Q9H2S5 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
RNF39Q9H2S5 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
RNF39Q9H2S5 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
RNF39Q9H2S5 AC009804.1-201ENST00000400949 179 ntBASIC7.02□□□□□ -1.29
RNF39Q9H2S5 MIR541-201ENST00000401360 84 ntBASIC7.02□□□□□ -1.29
RNF39Q9H2S5 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
RNF39Q9H2S5 AC125238.1-201ENST00000448842 249 ntBASIC7.02□□□□□ -1.29
RNF39Q9H2S5 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.02□□□□□ -1.29
RNF39Q9H2S5 RN7SL51P-201ENST00000468230 285 ntBASIC7.02□□□□□ -1.29
RNF39Q9H2S5 AC092754.1-201ENST00000472975 479 ntBASIC7.02□□□□□ -1.29
RNF39Q9H2S5 AC022206.1-201ENST00000495947 347 ntBASIC7.02□□□□□ -1.29
RNF39Q9H2S5 AL513534.2-201ENST00000603836 250 ntBASIC7.02□□□□□ -1.29
RNF39Q9H2S5 AL355480.1-201ENST00000629041 99 ntBASIC7.02□□□□□ -1.29
RNF39Q9H2S5 AC012442.3-202ENST00000636742 206 ntBASIC7.02□□□□□ -1.29
RNF39Q9H2S5 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RNF39Q9H2S5 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
RNF39Q9H2S5 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.02□□□□□ -1.29
RNF39Q9H2S5 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.02□□□□□ -1.29
RNF39Q9H2S5 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
RNF39Q9H2S5 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
RNF39Q9H2S5 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
RNF39Q9H2S5 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
RNF39Q9H2S5 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.02□□□□□ -1.29
RNF39Q9H2S5 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RNF39Q9H2S5 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RNF39Q9H2S5 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
RNF39Q9H2S5 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
RNF39Q9H2S5 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF39Q9H2S5 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF39Q9H2S5 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
RNF39Q9H2S5 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF39Q9H2S5 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF39Q9H2S5 RN7SKP237-201ENST00000364663 301 ntBASIC7.01□□□□□ -1.29
RNF39Q9H2S5 SNORA18.2-201ENST00000383865 132 ntBASIC7.01□□□□□ -1.29
RNF39Q9H2S5 MIR1185-2-201ENST00000408687 86 ntBASIC7.01□□□□□ -1.29
RNF39Q9H2S5 AC007738.1-201ENST00000413892 348 ntBASIC7.01□□□□□ -1.29
RNF39Q9H2S5 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RNF39Q9H2S5 AC012308.1-201ENST00000451232 178 ntBASIC7.01□□□□□ -1.29
RNF39Q9H2S5 RPL30P14-201ENST00000482744 348 ntBASIC7.01□□□□□ -1.29
RNF39Q9H2S5 RNU6-448P-201ENST00000517052 107 ntBASIC7.01□□□□□ -1.29
RNF39Q9H2S5 AC068657.1-201ENST00000520807 306 ntBASIC7.01□□□□□ -1.29
RNF39Q9H2S5 CYCSP25-201ENST00000525280 316 ntBASIC7.01□□□□□ -1.29
RNF39Q9H2S5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC7.01□□□□□ -1.29
RNF39Q9H2S5 MIR4502-201ENST00000580432 81 ntBASIC7.01□□□□□ -1.29
RNF39Q9H2S5 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.01□□□□□ -1.29
RNF39Q9H2S5 AC124916.2-201ENST00000604416 224 ntBASIC7.01□□□□□ -1.29
RNF39Q9H2S5 RPSAP75-201ENST00000605848 301 ntBASIC7.01□□□□□ -1.29
RNF39Q9H2S5 MIR6071-201ENST00000616741 78 ntBASIC7.01□□□□□ -1.29
RNF39Q9H2S5 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RNF39Q9H2S5 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF39Q9H2S5 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF39Q9H2S5 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.01□□□□□ -1.29
RNF39Q9H2S5 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.01□□□□□ -1.29
RNF39Q9H2S5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC7.01□□□□□ -1.29
RNF39Q9H2S5 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7□□□□□ -1.29
RNF39Q9H2S5 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7□□□□□ -1.29
RNF39Q9H2S5 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
RNF39Q9H2S5 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7□□□□□ -1.29
RNF39Q9H2S5 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC7□□□□□ -1.29
RNF39Q9H2S5 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7□□□□□ -1.29
RNF39Q9H2S5 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7□□□□□ -1.29
RNF39Q9H2S5 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
RNF39Q9H2S5 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7□□□□□ -1.29
RNF39Q9H2S5 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7□□□□□ -1.29
RNF39Q9H2S5 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
RNF39Q9H2S5 RNU6-380P-201ENST00000410207 107 ntBASIC7□□□□□ -1.29
RNF39Q9H2S5 AL645608.4-201ENST00000423619 154 ntBASIC7□□□□□ -1.29
RNF39Q9H2S5 AC063976.3-201ENST00000426849 329 ntBASIC7□□□□□ -1.29
RNF39Q9H2S5 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC7□□□□□ -1.29
RNF39Q9H2S5 MRPS17P9-201ENST00000511924 393 ntBASIC7□□□□□ -1.29
RNF39Q9H2S5 AC114781.3-201ENST00000512083 142 ntBASIC7□□□□□ -1.29
RNF39Q9H2S5 RNU6-917P-201ENST00000516294 104 ntBASIC7□□□□□ -1.29
RNF39Q9H2S5 RNU2-44P-201ENST00000516795 194 ntBASIC7□□□□□ -1.29
RNF39Q9H2S5 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7□□□□□ -1.29
RNF39Q9H2S5 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7□□□□□ -1.29
RNF39Q9H2S5 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC7□□□□□ -1.29
RNF39Q9H2S5 AC100827.5-201ENST00000615883 426 ntBASIC7□□□□□ -1.29
RNF39Q9H2S5 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7□□□□□ -1.29
RNF39Q9H2S5 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7□□□□□ -1.29
RNF39Q9H2S5 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7□□□□□ -1.29
RNF39Q9H2S5 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
RNF39Q9H2S5 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
RNF39Q9H2S5 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7□□□□□ -1.29
RNF39Q9H2S5 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
RNF39Q9H2S5 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7□□□□□ -1.29
RNF39Q9H2S5 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RNF39Q9H2S5 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
RNF39Q9H2S5 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms