Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RNU6-677P-201ENST00000516914 101 ntBASIC5.39□□□□□ -1.55
NUCKS1Q9H1E3 SCARNA24.2-201ENST00000516968 130 ntBASIC5.39□□□□□ -1.55
NUCKS1Q9H1E3 AC134698.5-201ENST00000519444 336 ntBASIC5.39□□□□□ -1.55
NUCKS1Q9H1E3 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.39□□□□□ -1.55
NUCKS1Q9H1E3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.39□□□□□ -1.55
NUCKS1Q9H1E3 AC067852.3-201ENST00000589177 561 ntBASIC5.39□□□□□ -1.55
NUCKS1Q9H1E3 AC068790.4-201ENST00000602474 263 ntBASIC5.39□□□□□ -1.55
NUCKS1Q9H1E3 AP001485.1-201ENST00000604799 199 ntBASIC5.39□□□□□ -1.55
NUCKS1Q9H1E3 AC211433.2-201ENST00000608433 387 ntBASIC5.39□□□□□ -1.55
NUCKS1Q9H1E3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.39□□□□□ -1.55
NUCKS1Q9H1E3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
NUCKS1Q9H1E3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUCKS1Q9H1E3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NUCKS1Q9H1E3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NUCKS1Q9H1E3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 ZNF285B-201ENST00000561698 1767 ntBASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 Y_RNA.27-201ENST00000362540 103 ntBASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 RNU6-371P-201ENST00000364283 108 ntBASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 SNORA70-201ENST00000384436 135 ntBASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 RPL23AP27-201ENST00000415161 451 ntBASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 DDX39BP1-205ENST00000422507 192 ntBASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 CKS1BP6-201ENST00000424932 240 ntBASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 RPL21P41-201ENST00000459863 264 ntBASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 RPL37P6-201ENST00000460682 294 ntBASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 RPL30P11-201ENST00000495304 339 ntBASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 AC074250.1-201ENST00000511117 192 ntBASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 AC018442.3-201ENST00000523025 183 ntBASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 HNRNPCP4-201ENST00000571636 900 ntBASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 OR1M4P-201ENST00000589199 287 ntBASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 AC006116.3-201ENST00000592968 361 ntBASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 AC005344.1-201ENST00000613391 459 ntBASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 U2.14-201ENST00000615943 113 ntBASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 MIR6864-201ENST00000617935 70 ntBASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.38□□□□□ -1.55
NUCKS1Q9H1E3 AL391684.1-202ENST00000641293 1636 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 SCN1A-220ENST00000641603 12506 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 RNVU1-3-201ENST00000364313 161 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 Y_RNA.541-201ENST00000384640 113 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 RPS29P13-201ENST00000402041 169 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 AL591034.2-201ENST00000402839 359 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 RNU2-21P-201ENST00000410368 188 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 RN7SKP213-201ENST00000410746 298 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 EIF4HP2-201ENST00000424380 563 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 CYCSP43-201ENST00000438233 310 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 TPT1P13-201ENST00000449760 499 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 VN1R105P-201ENST00000486595 910 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 AC016065.2-201ENST00000514530 444 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 RN7SKP60-201ENST00000516985 239 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 MRPS36P4-201ENST00000534436 298 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 HMGN2P6-201ENST00000551091 273 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 AL121917.1-203ENST00000605534 577 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 AC008962.1-201ENST00000605729 304 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 AC009643.2-201ENST00000603543 1448 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 SMG1P6-201ENST00000532337 2930 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 ZNF299P-201ENST00000406845 1804 ntBASIC5.37□□□□□ -1.55
NUCKS1Q9H1E3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms