Protein–RNA interactions for Protein: Q9H0Q0

FAM49A, Protein FAM49A, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49AQ9H0Q0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 TEX21P-201ENST00000447107 1476 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 FGF7P2-201ENST00000332473 296 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 RNY4P16-201ENST00000364768 94 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 SNORA40.3-201ENST00000390964 122 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 RPL21P3-201ENST00000395517 478 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 AC063976.3-201ENST00000426849 329 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 AP1S2P1-201ENST00000457344 379 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 TPT1P7-201ENST00000458300 517 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 AC146507.2-201ENST00000460608 476 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 RAP1BP2-201ENST00000478270 544 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 MTND1P3-201ENST00000484956 952 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 MLLT10P2-201ENST00000506434 249 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 RNU2-46P-201ENST00000517038 113 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 MED28P6-201ENST00000558776 231 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 MIR3913-1-201ENST00000577744 102 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 NRBF2P5-201ENST00000603087 788 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 AC087752.4-201ENST00000605911 462 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 AL360181.4-201ENST00000621752 134 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 AC006111.3-201ENST00000622137 383 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 AC091953.2-201ENST00000623979 160 ntBASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
FAM49AQ9H0Q0 AC116096.1-201ENST00000566804 2314 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 AL138713.1-201ENST00000624026 2130 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 MTCO1P9-201ENST00000505577 1534 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 RNU1-112P-201ENST00000364401 164 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 RNU6-637P-201ENST00000384050 107 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 MIR196B-201ENST00000384852 84 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 SNORD115.1-201ENST00000391109 76 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 AL360182.1-201ENST00000397433 468 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 AL138827.1-201ENST00000402666 306 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 NDUFB4P5-201ENST00000415445 361 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 PPP1R11P2-201ENST00000423543 382 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 AC233728.2-201ENST00000425348 757 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 MTATP6P4-201ENST00000427725 675 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 USP9YP14-201ENST00000430663 563 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 KATNBL1P3-201ENST00000443475 909 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 UQCRHP3-201ENST00000451503 251 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 AC234775.1-201ENST00000454247 670 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 RPS15AP36-201ENST00000492022 382 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 AC112204.1-201ENST00000502591 103 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 MTCO3P7-201ENST00000510008 774 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 AC114797.1-201ENST00000514003 728 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 RNA5SP468-201ENST00000516782 93 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 RPL21P5-201ENST00000554662 472 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 AC005951.2-201ENST00000576282 495 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 BDH2P1-201ENST00000602288 736 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 SEPT7P9-203ENST00000604116 343 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 AC064807.4-201ENST00000607201 407 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 AC004067.1-201ENST00000608733 700 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 AC019226.1-201ENST00000625666 515 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 AC008264.2-201ENST00000610193 3731 ntBASIC3.1□□□□□ -1.91
FAM49AQ9H0Q0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.09□□□□□ -1.91
FAM49AQ9H0Q0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
FAM49AQ9H0Q0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
FAM49AQ9H0Q0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
FAM49AQ9H0Q0 TAB3P1-202ENST00000452645 1634 ntBASIC3.09□□□□□ -1.91
FAM49AQ9H0Q0 RNU4-1-201ENST00000363925 141 ntBASIC3.09□□□□□ -1.91
FAM49AQ9H0Q0 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.09□□□□□ -1.91
FAM49AQ9H0Q0 RPS3AP36-201ENST00000398190 775 ntBASIC3.09□□□□□ -1.91
FAM49AQ9H0Q0 RPS4XP8-201ENST00000402039 771 ntBASIC3.09□□□□□ -1.91
FAM49AQ9H0Q0 AL136372.1-201ENST00000403060 228 ntBASIC3.09□□□□□ -1.91
FAM49AQ9H0Q0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.09□□□□□ -1.91
FAM49AQ9H0Q0 Y_RNA.598-201ENST00000410480 95 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms