Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 FTX_3.1-201ENST00000610451 147 ntBASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 AL021997.2-201ENST00000615674 271 ntBASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 AL773545.4-201ENST00000637262 310 ntBASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 AL513478.4-201ENST00000641636 310 ntBASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 AC009962.1-201ENST00000567327 3813 ntBASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 ADAM3A-203ENST00000461344 2157 ntBASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-1Q9BYR8 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 ZNF702P-202ENST00000434269 1966 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 RNU6-778P-201ENST00000363269 103 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 RNU6-1048P-201ENST00000364054 107 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 SNORD115-30-201ENST00000364117 82 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 Y_RNA.415-201ENST00000384012 112 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 MIR138-2-201ENST00000384916 84 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 MIR549A-201ENST00000385268 96 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 MIR208B-201ENST00000401172 77 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 AL606845.1-201ENST00000404881 255 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 GGA1-205ENST00000405147 575 ntTSL 4 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 RNU6-588P-201ENST00000410281 105 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 RNU6-855P-201ENST00000410395 104 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 AC063976.4-201ENST00000421971 163 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 AL049745.1-201ENST00000433953 286 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 AL590399.4-201ENST00000436561 601 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 AC009244.1-201ENST00000450566 258 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 AC144530.1-201ENST00000452862 555 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 snoU13.24-201ENST00000458998 104 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 SNRPCP3-201ENST00000474888 476 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 SNORA31.16-201ENST00000516773 139 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 CYP4A27P-201ENST00000567218 190 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 MIR4724-201ENST00000579485 89 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 SNRPGP15-201ENST00000600149 222 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 SNORA74.4-201ENST00000607595 199 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 ASB8-218ENST00000629941 278 ntTSL 5 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 AC068647.2-201ENST00000637380 353 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 AC079776.5-201ENST00000641920 211 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 AC068700.1-201ENST00000565862 3754 ntBASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-1Q9BYR8 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
KRTAP3-1Q9BYR8 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.93
KRTAP3-1Q9BYR8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.03□□□□□ -1.93
KRTAP3-1Q9BYR8 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
KRTAP3-1Q9BYR8 AC139713.2-214ENST00000642059 1811 ntBASIC3.03□□□□□ -1.93
KRTAP3-1Q9BYR8 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
KRTAP3-1Q9BYR8 AC022336.2-201ENST00000568966 2538 ntBASIC3.02□□□□□ -1.93
KRTAP3-1Q9BYR8 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
KRTAP3-1Q9BYR8 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
KRTAP3-1Q9BYR8 AL136164.4-201ENST00000625013 2135 ntBASIC3.02□□□□□ -1.93
KRTAP3-1Q9BYR8 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
KRTAP3-1Q9BYR8 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
KRTAP3-1Q9BYR8 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
KRTAP3-1Q9BYR8 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
KRTAP3-1Q9BYR8 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
KRTAP3-1Q9BYR8 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC3.02□□□□□ -1.93
KRTAP3-1Q9BYR8 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
KRTAP3-1Q9BYR8 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
KRTAP3-1Q9BYR8 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms