Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 OR51A5P-201ENST00000415429 942 ntBASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 AF228730.2-201ENST00000438784 848 ntBASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 GAPDHP27-201ENST00000447427 1020 ntBASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 FABP5P13-201ENST00000452144 328 ntBASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 RPS20P20-201ENST00000460498 340 ntBASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 AC078785.3-201ENST00000476607 425 ntBASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 OR5AL2P-201ENST00000532185 920 ntBASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 AC005951.2-201ENST00000576282 495 ntBASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 AL162413.1-201ENST00000603198 110 ntBASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 AL354950.2-201ENST00000617939 290 ntBASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 MIR1321-201ENST00000637766 79 ntBASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 OR4G2P-202ENST00000641004 1759 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 AL356274.2-201ENST00000624379 3752 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 RNU6-877P-201ENST00000383868 107 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 RNU6-606P-201ENST00000384721 111 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 MIR454-201ENST00000390180 115 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 RN7SKP285-201ENST00000410137 318 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 RNA5SP129-201ENST00000410276 118 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 RN7SKP140-201ENST00000411196 284 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 MTND1P2-201ENST00000430604 821 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 HMGB1P27-201ENST00000431429 603 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 NEFMP1-201ENST00000443423 1006 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 Z75741.1-201ENST00000446793 314 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 FDX1P2-201ENST00000450769 375 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 FGF7P6-202ENST00000451282 293 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 RNU7-182P-201ENST00000459009 62 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 RPL31P58-201ENST00000469001 379 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 RPL32P34-201ENST00000486380 400 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 RPL36AP51-201ENST00000487216 318 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 RPL21P13-201ENST00000488305 481 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 AC026333.2-201ENST00000542164 106 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 RPS3AP4-201ENST00000555161 764 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 MIR3921-201ENST00000577308 85 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 DPPA3P3-201ENST00000603842 430 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 YPEL5P2-201ENST00000605553 359 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 AC006023.2-201ENST00000609916 167 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PAAF1Q9BRP4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 SDAD1P2-201ENST00000441308 2028 ntBASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 RNU1-18P-201ENST00000363062 164 ntBASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 RNU6-525P-201ENST00000363685 104 ntBASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 Y_RNA.295-201ENST00000364918 102 ntBASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 RNU6-946P-201ENST00000383878 107 ntBASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 RNU6-1158P-201ENST00000391167 107 ntBASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 MIR1290-201ENST00000408735 78 ntBASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 AC114491.1-201ENST00000416095 246 ntBASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 RNU6-420P-201ENST00000458780 107 ntBASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 RN7SL93P-201ENST00000463035 293 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms