Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MTHFD2P2-201ENST00000407725 247 ntBASIC5.3□□□□□ -1.56
USB1Q9BQ65 RNU2-52P-201ENST00000410680 190 ntBASIC5.3□□□□□ -1.56
USB1Q9BQ65 RNU6-1245P-201ENST00000411130 106 ntBASIC5.3□□□□□ -1.56
USB1Q9BQ65 RPL30P13-201ENST00000418873 348 ntBASIC5.3□□□□□ -1.56
USB1Q9BQ65 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.3□□□□□ -1.56
USB1Q9BQ65 RPL7AP25-201ENST00000423357 805 ntBASIC5.3□□□□□ -1.56
USB1Q9BQ65 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.3□□□□□ -1.56
USB1Q9BQ65 AL663074.2-201ENST00000440621 479 ntBASIC5.3□□□□□ -1.56
USB1Q9BQ65 RPL7AP61-201ENST00000443410 636 ntBASIC5.3□□□□□ -1.56
USB1Q9BQ65 AC097462.2-201ENST00000504623 481 ntBASIC5.3□□□□□ -1.56
USB1Q9BQ65 RNU6-1198P-201ENST00000516904 67 ntBASIC5.3□□□□□ -1.56
USB1Q9BQ65 CARD18-203ENST00000532895 422 ntTSL 2 BASIC5.3□□□□□ -1.56
USB1Q9BQ65 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.3□□□□□ -1.56
USB1Q9BQ65 AC024153.1-201ENST00000603103 365 ntBASIC5.3□□□□□ -1.56
USB1Q9BQ65 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USB1Q9BQ65 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.3□□□□□ -1.56
USB1Q9BQ65 U6.99-201ENST00000637524 83 ntBASIC5.3□□□□□ -1.56
USB1Q9BQ65 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.3□□□□□ -1.56
USB1Q9BQ65 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USB1Q9BQ65 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
USB1Q9BQ65 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USB1Q9BQ65 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USB1Q9BQ65 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USB1Q9BQ65 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USB1Q9BQ65 AC107027.3-201ENST00000565095 3473 ntBASIC5.3□□□□□ -1.56
USB1Q9BQ65 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.3□□□□□ -1.56
USB1Q9BQ65 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.3□□□□□ -1.56
USB1Q9BQ65 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USB1Q9BQ65 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USB1Q9BQ65 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USB1Q9BQ65 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
USB1Q9BQ65 AC093535.2-201ENST00000624769 2326 ntBASIC5.29□□□□□ -1.56
USB1Q9BQ65 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USB1Q9BQ65 AC079753.1-201ENST00000623243 3868 ntBASIC5.29□□□□□ -1.56
USB1Q9BQ65 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
USB1Q9BQ65 MIR487A-201ENST00000385009 80 ntBASIC5.29□□□□□ -1.56
USB1Q9BQ65 U3.37-201ENST00000408528 213 ntBASIC5.29□□□□□ -1.56
USB1Q9BQ65 RN7SKP151-201ENST00000410230 316 ntBASIC5.29□□□□□ -1.56
USB1Q9BQ65 MYL6P5-201ENST00000412707 459 ntBASIC5.29□□□□□ -1.56
USB1Q9BQ65 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.29□□□□□ -1.56
USB1Q9BQ65 AL589765.3-201ENST00000446084 462 ntBASIC5.29□□□□□ -1.56
USB1Q9BQ65 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.29□□□□□ -1.56
USB1Q9BQ65 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC5.29□□□□□ -1.56
USB1Q9BQ65 AC020593.1-201ENST00000507399 299 ntBASIC5.29□□□□□ -1.56
USB1Q9BQ65 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.29□□□□□ -1.56
USB1Q9BQ65 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USB1Q9BQ65 SNORA25.12-201ENST00000516202 82 ntBASIC5.29□□□□□ -1.56
USB1Q9BQ65 RN7SKP238-201ENST00000516483 249 ntBASIC5.29□□□□□ -1.56
USB1Q9BQ65 RNU7-121P-201ENST00000516604 62 ntBASIC5.29□□□□□ -1.56
USB1Q9BQ65 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.29□□□□□ -1.56
USB1Q9BQ65 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.29□□□□□ -1.56
USB1Q9BQ65 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.29□□□□□ -1.56
USB1Q9BQ65 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.29□□□□□ -1.56
USB1Q9BQ65 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.29□□□□□ -1.56
USB1Q9BQ65 AL357075.2-201ENST00000614906 189 ntBASIC5.29□□□□□ -1.56
USB1Q9BQ65 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USB1Q9BQ65 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USB1Q9BQ65 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USB1Q9BQ65 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USB1Q9BQ65 AL359955.1-201ENST00000455242 3275 ntBASIC5.29□□□□□ -1.56
USB1Q9BQ65 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USB1Q9BQ65 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.29□□□□□ -1.56
USB1Q9BQ65 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USB1Q9BQ65 AP001541.1-201ENST00000623322 1904 ntBASIC5.29□□□□□ -1.56
USB1Q9BQ65 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.29□□□□□ -1.56
USB1Q9BQ65 PCAT14-202ENST00000627127 3935 ntBASIC5.29□□□□□ -1.56
USB1Q9BQ65 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USB1Q9BQ65 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
USB1Q9BQ65 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
USB1Q9BQ65 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USB1Q9BQ65 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
USB1Q9BQ65 AC005332.5-201ENST00000591222 2919 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
USB1Q9BQ65 AC110491.1-201ENST00000562191 2010 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.28□□□□□ -1.56
USB1Q9BQ65 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.28□□□□□ -1.56
USB1Q9BQ65 BCORP1-203ENST00000513194 5093 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.28□□□□□ -1.56
USB1Q9BQ65 RN7SKP128-201ENST00000364270 303 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 RNU6-275P-201ENST00000364910 107 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 AL035079.1-201ENST00000405210 287 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 Y_RNA.595-201ENST00000410403 105 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 RNA5SP31-201ENST00000411144 127 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.28□□□□□ -1.56
USB1Q9BQ65 NDUFB4P7-201ENST00000423198 363 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 RAB28P5-201ENST00000427490 651 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 AL356867.1-201ENST00000429623 299 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.28□□□□□ -1.56
USB1Q9BQ65 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.28□□□□□ -1.56
USB1Q9BQ65 AC009963.2-201ENST00000453431 138 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 RNU6-1211P-201ENST00000459179 105 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 KC877373.1-201ENST00000479066 408 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 AC023424.1-201ENST00000496058 459 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.28□□□□□ -1.56
USB1Q9BQ65 RNU6-513P-201ENST00000516104 104 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 RNU6-966P-201ENST00000516479 104 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 Y_RNA.686-201ENST00000516548 134 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 RNU6-1234P-201ENST00000516877 103 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms