Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A4AQ96JQ5 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A4AQ96JQ5 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.25□□□□□ -1.41
MS4A4AQ96JQ5 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A4AQ96JQ5 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
MS4A4AQ96JQ5 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A4AQ96JQ5 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC6.25□□□□□ -1.41
MS4A4AQ96JQ5 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A4AQ96JQ5 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 RNU1-32P-201ENST00000363937 159 ntBASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 AC097484.1-201ENST00000471148 389 ntBASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 AC008897.1-201ENST00000494006 347 ntBASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 RNU6-966P-201ENST00000516479 104 ntBASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 AC137627.1-201ENST00000545761 289 ntBASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 HMGN2P47-201ENST00000559378 272 ntBASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 MIR5571-201ENST00000577998 113 ntBASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 AC006380.1-201ENST00000603598 186 ntBASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 AC091932.3-201ENST00000624223 323 ntBASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A4AQ96JQ5 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 MTND5P32-201ENST00000560711 1802 ntBASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 MTND5P35-201ENST00000557537 1720 ntBASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 COX6B1P1-201ENST00000415962 213 ntBASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 AC006499.6-201ENST00000511169 607 ntBASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 AC091874.1-201ENST00000511402 339 ntBASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 AC105254.2-201ENST00000603636 436 ntBASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 AP000346.3-201ENST00000622821 210 ntBASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 U6.95-201ENST00000636931 70 ntBASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 AF127577.6-201ENST00000623352 2191 ntBASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 AC011504.1-201ENST00000623331 4103 ntBASIC6.23□□□□□ -1.41
MS4A4AQ96JQ5 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 RNU6-873P-201ENST00000363833 107 ntBASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 Y_RNA.179-201ENST00000363844 90 ntBASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 RNU1-146P-201ENST00000364015 165 ntBASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 SNORA66-201ENST00000384792 133 ntBASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 MIR626-201ENST00000385032 94 ntBASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 MIR1290-201ENST00000408735 78 ntBASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 RNU6-1199P-201ENST00000411249 104 ntBASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 TMEM183AP1-205ENST00000432739 290 ntBASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 CKS1BP5-201ENST00000434172 273 ntBASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 AC092991.1-201ENST00000477176 376 ntBASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 MIR4301-201ENST00000577203 66 ntBASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 MIR3921-201ENST00000577308 85 ntBASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 AC209154.1-201ENST00000582156 337 ntBASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 AL133481.2-203ENST00000607558 139 ntBASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 CCT7-217ENST00000626868 249 ntTSL 5 BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 MIR6844-201ENST00000637122 62 ntBASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms