Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MIR6075-201ENST00000620782 95 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AC002064.3-201ENST00000623448 346 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AC092656.1-203ENST00000624134 423 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 MTND5P19-201ENST00000424872 1794 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 RNU5F-6P-201ENST00000362979 116 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 RNU4-75P-201ENST00000364621 146 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 RNU4-91P-201ENST00000364778 135 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 RNU6-769P-201ENST00000384407 104 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 RNY3P10-201ENST00000384764 102 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 MIR7-3-201ENST00000384898 110 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 RN7SKP220-201ENST00000410611 288 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 RNA5SP120-201ENST00000410900 112 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AC245054.2-201ENST00000415639 319 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 MTCO2P34-201ENST00000421994 607 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AL389915.1-201ENST00000422463 466 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AC006028.1-201ENST00000438379 402 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AL714022.1-201ENST00000439897 151 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 FAM103A2P-201ENST00000444122 354 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 UQCRHP3-201ENST00000451503 251 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 RNU7-59P-201ENST00000459101 61 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AC087588.1-201ENST00000462203 316 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AC008481.1-201ENST00000463278 396 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AC233702.1-201ENST00000482905 502 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 LARP1BP2-201ENST00000486594 519 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AC002456.2-201ENST00000509356 380 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 SNORA31.26-201ENST00000517250 137 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AP000873.5-201ENST00000533906 236 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 MIR5680-201ENST00000577577 84 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 MIR548AB-201ENST00000584917 84 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 BNIP3P23-201ENST00000599655 511 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AL606834.2-201ENST00000602954 668 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AC122108.2-201ENST00000611946 526 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AC098679.4-201ENST00000624241 654 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AC138915.1-201ENST00000565427 1685 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AC006378.2-201ENST00000623178 2476 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 AC093908.1-201ENST00000623125 8092 ntBASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
PDLIM5Q96HC4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.93
PDLIM5Q96HC4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
PDLIM5Q96HC4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.93
PDLIM5Q96HC4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 SNORA63.1-201ENST00000362493 131 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 SNORA71.3-201ENST00000362582 128 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 RNA5SP72-201ENST00000364442 117 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 SNORA75-201ENST00000384158 137 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 RNU6-217P-201ENST00000384164 104 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 RNU6-278P-201ENST00000390945 109 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 DEFB108C-201ENST00000400154 252 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 RNA5SP274-201ENST00000410484 108 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 CDK8P2-201ENST00000415020 547 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 SDCBPP3-201ENST00000419629 891 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 AL158156.1-201ENST00000422509 473 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 AC109583.1-201ENST00000432156 268 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 AL031667.1-201ENST00000440222 725 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 ELOCP30-201ENST00000447108 299 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 OR6K1P-201ENST00000456766 971 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 RNU6-956P-201ENST00000458868 103 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 RPL37P6-201ENST00000460682 294 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 RN7SL807P-201ENST00000470923 297 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 AP000797.1-201ENST00000478870 387 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 RN7SL20P-201ENST00000488827 297 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 AL160314.1-201ENST00000490836 438 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 RPS27P26-201ENST00000494583 239 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 HSPD1P15-201ENST00000505573 1122 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 AP000857.1-201ENST00000532151 543 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 AC013828.2-201ENST00000532487 235 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 AC012213.3-201ENST00000577199 777 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 MIR5004-201ENST00000579078 107 ntBASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.02□□□□□ -1.93
PDLIM5Q96HC4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 198 ms