Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 AC068587.5-201ENST00000528506 175 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 RPS3AP4-201ENST00000555161 764 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 AC027807.1-201ENST00000559921 996 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 HMGB1P6-201ENST00000569046 646 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 MIR5047-201ENST00000579212 100 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 AC017083.3-201ENST00000609955 700 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 ELF2P3-201ENST00000445099 1506 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 Y_RNA.9-201ENST00000362354 101 ntBASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 Y_RNA.554-201ENST00000384672 102 ntBASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 UBE2V1P8-201ENST00000437166 265 ntBASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 BNIP3P2-201ENST00000441221 577 ntBASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 MTATP6P30-201ENST00000443540 664 ntBASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 RPL9P32-201ENST00000464118 620 ntBASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 AC019235.1-201ENST00000503847 207 ntBASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 RNU6-1256P-201ENST00000516539 103 ntBASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 AP001646.1-201ENST00000527936 915 ntBASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 AL512360.1-201ENST00000555346 234 ntBASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 AL121576.1-201ENST00000556055 276 ntBASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 HMGB1P33-201ENST00000563485 527 ntBASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 AC007363.1-201ENST00000604736 620 ntBASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 SNORA51-201ENST00000606420 132 ntBASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 AC090517.2-201ENST00000614966 680 ntBASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 U4.6-201ENST00000621618 127 ntBASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 AC007998.5-201ENST00000622938 237 ntBASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 AC005609.4-201ENST00000625071 447 ntBASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHMP4CQ96CF2 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 SNORD9-201ENST00000362566 104 ntBASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 RNU6-179P-201ENST00000363350 107 ntBASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 SMIM11P1-201ENST00000369586 178 ntBASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 MIR490-201ENST00000384865 128 ntBASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 MIR493-201ENST00000385254 89 ntBASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 SDCBPP3-201ENST00000419629 891 ntBASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 ARF4P2-201ENST00000430209 526 ntBASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 AC073063.1-201ENST00000434352 607 ntBASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 MTATP6P16-201ENST00000434543 526 ntBASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 RPL37P6-201ENST00000460682 294 ntBASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 AC026784.1-201ENST00000507986 352 ntBASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 ARL2BPP6-201ENST00000512757 439 ntBASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 RN7SKP13-201ENST00000515933 244 ntBASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 AP006587.4-201ENST00000526053 529 ntBASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 AC010591.1-201ENST00000603941 649 ntBASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 MIR6075-201ENST00000620782 95 ntBASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 AL133383.2-201ENST00000622958 2336 ntBASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 ZNF680P1-201ENST00000436625 1469 ntBASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHMP4CQ96CF2 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.28□□□□□ -1.72
CHMP4CQ96CF2 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.28□□□□□ -1.72
CHMP4CQ96CF2 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHMP4CQ96CF2 MFSD8-233ENST00000641482 4860 ntBASIC4.28□□□□□ -1.72
CHMP4CQ96CF2 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.28□□□□□ -1.72
CHMP4CQ96CF2 RNU6-283P-201ENST00000364788 107 ntBASIC4.28□□□□□ -1.72
CHMP4CQ96CF2 SNORA70.4-201ENST00000365509 134 ntBASIC4.28□□□□□ -1.72
CHMP4CQ96CF2 RNU4-48P-201ENST00000365559 182 ntBASIC4.28□□□□□ -1.72
CHMP4CQ96CF2 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms