Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 FAM92A1P2-202ENST00000504766 877 ntBASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 NDUFB4P9-201ENST00000511646 388 ntBASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 AL355836.1-201ENST00000555951 870 ntBASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 AC034105.3-201ENST00000565294 442 ntBASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 LARP7P3-201ENST00000579888 337 ntBASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 AP000907.4-201ENST00000604143 237 ntBASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 AC006386.2-201ENST00000624491 75 ntBASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 AC012005.1-201ENST00000624575 75 ntBASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 AC066616.2-201ENST00000559334 1481 ntBASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 SDAD1P2-201ENST00000441308 2028 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 SNORA31-201ENST00000362607 130 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 Y_RNA.295-201ENST00000364918 102 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 RNU6-1283P-201ENST00000365314 105 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 RNU6-877P-201ENST00000383868 107 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 RNU6-701P-201ENST00000384059 107 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 SNORA36C-201ENST00000384289 132 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 KCTD9P3-201ENST00000434597 1169 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 SEPT14P3-201ENST00000439401 183 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 AL732372.2-207ENST00000445840 183 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 NFU1P2-201ENST00000448700 469 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 SEPT14P2-201ENST00000453405 183 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 RNU6-261P-201ENST00000459506 102 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 S100A11P2-201ENST00000467589 312 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 AC093663.1-201ENST00000497190 394 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 PRDX4P1-201ENST00000507189 574 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 SEPT14P4-201ENST00000513445 186 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 FO082796.1-201ENST00000523795 183 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 MED28P6-201ENST00000558776 231 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 AP005205.1-201ENST00000563503 508 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 MTCO3P24-201ENST00000572729 782 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 BDH2P1-201ENST00000602288 736 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 AP002826.1-201ENST00000608835 315 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 AC012531.5-201ENST00000611375 151 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 MTND5P17-201ENST00000418405 1603 ntBASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
TRIM43Q96BQ3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 RNU1-108P-201ENST00000362556 161 ntBASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 Y_RNA.89-201ENST00000363031 102 ntBASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 SNORA62.1-201ENST00000364287 154 ntBASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 SNORD6-201ENST00000365444 73 ntBASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 RNU6-1158P-201ENST00000391167 107 ntBASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 AL591416.1-201ENST00000404015 867 ntBASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 AMD1P2-201ENST00000412936 992 ntBASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 AC093106.2-201ENST00000428212 385 ntBASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 VDAC1P3-201ENST00000434069 851 ntBASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 U3.44-201ENST00000458938 192 ntBASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 RNU7-182P-201ENST00000459009 62 ntBASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 AL049874.1-201ENST00000489560 388 ntBASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 SNORA31.8-201ENST00000516327 108 ntBASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 SNORA40.12-201ENST00000516329 111 ntBASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM43Q96BQ3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms