Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 AC018437.1-201ENST00000492214 406 ntBASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 HMGB3P16-201ENST00000508037 287 ntBASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 RN7SKP122-201ENST00000515923 296 ntBASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 AC022882.1-201ENST00000532142 501 ntBASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 AL110118.1-201ENST00000553543 400 ntBASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 MIR5692A1-201ENST00000580523 69 ntBASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 AC005357.1-201ENST00000588399 301 ntBASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 AC093227.2-201ENST00000589357 285 ntBASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 AL021879.1-201ENST00000611756 288 ntBASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 MIR4275-201ENST00000636486 87 ntBASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 Y_RNA.210-201ENST00000364161 110 ntBASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 Y_RNA.424-201ENST00000384063 103 ntBASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 U3.30-201ENST00000391308 210 ntBASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 MIR1193-201ENST00000408109 78 ntBASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 AL583843.1-201ENST00000456070 346 ntBASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 RPS17P2-201ENST00000461663 408 ntBASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 AC008571.1-201ENST00000467232 300 ntBASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 RPL23AP2-201ENST00000471227 466 ntBASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 AC108145.1-201ENST00000503770 153 ntBASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 AC114801.2-201ENST00000503825 781 ntBASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 AP005902.1-201ENST00000521358 186 ntBASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 AC022616.4-201ENST00000522985 181 ntBASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 RN7SL435P-201ENST00000584418 282 ntBASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 HMGB1P50-201ENST00000605814 607 ntBASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
VTI1AQ96AJ9 AL731566.1-201ENST00000620490 1937 ntBASIC5.4□□□□□ -1.55
VTI1AQ96AJ9 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
VTI1AQ96AJ9 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
VTI1AQ96AJ9 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.4□□□□□ -1.55
VTI1AQ96AJ9 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 ZNF72P-201ENST00000425869 1908 ntBASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 Y_RNA.314-201ENST00000365114 102 ntBASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 Y_RNA.380-201ENST00000365663 111 ntBASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 RN7SKP27-201ENST00000410684 333 ntBASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 CYCSP33-201ENST00000414485 327 ntBASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 RPS15AP10-201ENST00000432472 382 ntBASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 PCMTD1P1-201ENST00000455560 355 ntBASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 RPS23P3-201ENST00000470993 430 ntBASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 RNA5SP249-201ENST00000516127 99 ntBASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 AC069113.1-201ENST00000517763 267 ntBASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 AL049839.1-201ENST00000556151 657 ntBASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 LRRC37A5P-203ENST00000580181 585 ntBASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 AC005344.1-201ENST00000613391 459 ntBASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VTI1AQ96AJ9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 SNORA36C-201ENST00000384289 132 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 RNU6-174P-201ENST00000410406 106 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 RNU6-607P-201ENST00000411283 108 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 AL732292.1-201ENST00000426692 226 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 HMGB1P27-201ENST00000431429 603 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 AL353997.1-201ENST00000432936 108 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 RPL26P6-201ENST00000440913 438 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 DYNLT3P2-201ENST00000442517 295 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 AL121871.1-201ENST00000443413 436 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 AL359073.1-201ENST00000448036 403 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 AL691482.1-201ENST00000453255 87 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms