Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC091903.1-201ENST00000624322 454 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
SLC44A1Q8WWI5 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 OR5J1P-201ENST00000313544 939 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 SNORA23-201ENST00000365128 182 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 MIR23A-201ENST00000385245 73 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 AC110754.1-201ENST00000399740 601 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 GSTA9P-201ENST00000406231 611 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 RPL21P24-201ENST00000413752 448 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 MTCO1P21-201ENST00000416634 589 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 ELOCP4-201ENST00000420090 333 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 C1DP4-201ENST00000455429 424 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 RPL9P33-201ENST00000484311 566 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 AC006483.1-201ENST00000487308 313 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 APOOP4-201ENST00000513530 597 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 AL163153.1-201ENST00000554223 283 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 MIR3944-201ENST00000581277 108 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 AP001330.4-201ENST00000604350 154 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 AP000860.1-201ENST00000605250 559 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 U3.45-201ENST00000607547 219 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 AC107294.3-201ENST00000609211 526 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 AL161734.1-201ENST00000609720 557 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 AL591516.1-201ENST00000611326 274 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 SNHG22-203ENST00000617833 660 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 AC068880.5-201ENST00000624331 290 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 OR5AK4P-201ENST00000635912 903 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 CR848007.1-201ENST00000442354 1699 ntBASIC3.27□□□□□ -1.89
SLC44A1Q8WWI5 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 FAM35CP-201ENST00000554755 2470 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 HSPE1P11-201ENST00000339579 310 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 DEFB108F-201ENST00000344638 222 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 Y_RNA.6-201ENST00000362350 114 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 RNA5SP387-201ENST00000364226 106 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 RNY1P12-201ENST00000364251 105 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 Y_RNA.296-201ENST00000364930 108 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 RNU6-169P-201ENST00000365336 107 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 SNORA36C-201ENST00000384289 132 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 Y_RNA.516-201ENST00000384541 124 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 Y_RNA.619-201ENST00000410951 90 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 AC007283.2-201ENST00000424739 197 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 RPS3AP44-201ENST00000425466 790 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 AL358934.1-201ENST00000432346 324 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 AC092473.1-201ENST00000441098 221 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 AC108860.1-201ENST00000484521 383 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 RPL21P13-201ENST00000488305 481 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 SNORA31.8-201ENST00000516327 108 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 RNU2-10P-201ENST00000516375 211 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 RNA5SP380-201ENST00000517190 98 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 OR5B10P-201ENST00000532869 642 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 AC123904.3-201ENST00000547218 814 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 MED28P6-201ENST00000558776 231 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 AC105224.1-201ENST00000587055 421 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 AP003465.2-201ENST00000602571 373 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 MIR98-201ENST00000606724 119 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 AL136313.1-201ENST00000624804 202 ntBASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SLC44A1Q8WWI5 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms