Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 SNORA16.1-201ENST00000364597 132 ntBASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 RNU6-932P-201ENST00000391108 106 ntBASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 AL357078.2-201ENST00000416486 427 ntBASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 RAC1P8-201ENST00000427086 527 ntBASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 AC234064.1-201ENST00000436312 247 ntBASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 RFC5P1-201ENST00000454419 874 ntBASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 TRBV1-201ENST00000476502 284 ntBASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 RPL38P4-201ENST00000502376 214 ntBASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 AL450336.1-201ENST00000605180 586 ntBASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 AC103710.1-201ENST00000610003 901 ntBASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 AC003001.2-201ENST00000616294 831 ntBASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 AL162373.1-201ENST00000620433 407 ntBASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 AC241585.2-209ENST00000638217 143 ntBASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 MTND4P27-201ENST00000450813 1354 ntBASIC2.05□□□□□ -2.08
CCDC112Q8NEF3 RSL24D1P8-201ENST00000434442 492 ntBASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 GXYLT1P1-201ENST00000446657 490 ntBASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 AC104058.1-201ENST00000448028 297 ntBASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 AC092757.1-201ENST00000467293 467 ntBASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 AC072039.1-201ENST00000477611 581 ntBASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 RN7SKP31-201ENST00000516354 278 ntBASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 SNORA48.10-201ENST00000516965 160 ntBASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 SCARNA11.3-201ENST00000517276 130 ntBASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 AL391261.3-201ENST00000557194 520 ntBASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 AC087465.1-201ENST00000560574 245 ntBASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 AL731537.2-201ENST00000561565 951 ntBASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 LARP7P2-201ENST00000575306 125 ntBASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 HMGN2P15-201ENST00000585707 270 ntBASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 AL512506.2-201ENST00000624472 458 ntBASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 AC131280.1-202ENST00000624067 4211 ntBASIC2.04□□□□□ -2.08
CCDC112Q8NEF3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 AL049641.1-201ENST00000441055 1948 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 RNU6-839P-201ENST00000363347 108 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 MIR17-201ENST00000385012 84 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 CIR1P3-201ENST00000405137 479 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 RNU2-43P-201ENST00000410306 190 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 PSMA6P3-201ENST00000428242 164 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 SDCBPP1-201ENST00000440192 890 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 BMI1P1-201ENST00000445879 941 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 TPT1P14-201ENST00000448018 505 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 MTCO1P48-201ENST00000448024 1096 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 RPL7P55-201ENST00000450522 746 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 Y_RNA.638-201ENST00000459374 113 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 RPL32P14-201ENST00000463196 378 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 AC093281.2-201ENST00000510153 597 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 RNU5A-7P-201ENST00000515979 116 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 RNU6-1282P-201ENST00000516735 96 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 HMGB1P1-201ENST00000522557 636 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 AC090502.2-201ENST00000549267 280 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 OR4K8P-201ENST00000578842 1048 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 AL671309.1-201ENST00000603750 544 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 AC244517.12-201ENST00000623581 663 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 AC080188.3-201ENST00000624842 748 ntBASIC2.03□□□□□ -2.08
CCDC112Q8NEF3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
CCDC112Q8NEF3 OR4G11P-202ENST00000642116 1414 ntBASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 RNU6-234P-201ENST00000365229 104 ntBASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 RNU6-657P-201ENST00000383904 107 ntBASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 MIR217-201ENST00000384817 110 ntBASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 AL450338.1-201ENST00000407987 512 ntBASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 CYCSP48-201ENST00000417124 323 ntBASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 AC092634.6-201ENST00000418558 192 ntBASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 AC034222.1-201ENST00000494052 532 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 156.4 ms