Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 Y_RNA.373-201ENST00000365600 103 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 RNU4-46P-201ENST00000410818 138 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 AL645937.1-202ENST00000421799 937 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 RPL21P109-201ENST00000422213 475 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 AC020550.1-201ENST00000447385 163 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 AC007547.1-201ENST00000462177 490 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 RPL21P8-201ENST00000465083 535 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 RPS29P22-201ENST00000472363 168 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 CCDC34P1-201ENST00000507441 517 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 TTC39CP1-201ENST00000512513 755 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 RNU7-30P-201ENST00000516835 62 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 RNU6-685P-201ENST00000517088 95 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 MTND4P7-201ENST00000523876 130 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 AL137161.1-201ENST00000532231 390 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 AC087241.2-201ENST00000535801 324 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 AL121576.1-201ENST00000556055 276 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 MIR5047-201ENST00000579212 100 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 MIR5684-201ENST00000585074 65 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 MIR4719-201ENST00000585233 84 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 VN1R80P-201ENST00000597126 338 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 AC068790.4-201ENST00000602474 263 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 AC011944.2-201ENST00000624440 683 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 AC244205.2-202ENST00000635781 342 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 AP004289.2-201ENST00000444413 1457 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 RNU6-522P-201ENST00000364497 107 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 Y_RNA.813-201ENST00000364639 102 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 RNA5SP366-201ENST00000365454 123 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 RNU6-116P-201ENST00000384042 109 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 RNU6-14P-201ENST00000384630 106 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 RNU6-510P-201ENST00000391239 108 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 RN7SKP32-201ENST00000410167 303 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 RNA5SP129-201ENST00000410276 118 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 RNU4-25P-201ENST00000410569 230 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 AC092809.3-201ENST00000415453 231 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 RPL26P29-201ENST00000415623 438 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 AL365400.1-201ENST00000431854 640 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 IFNA20P-201ENST00000436840 528 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 HMGB1P37-201ENST00000439613 609 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 RPS24P6-201ENST00000452670 400 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 snoU13.24-201ENST00000458998 104 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 RN7SL303P-201ENST00000469773 251 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 RN7SL738P-201ENST00000470264 297 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 HSPE1P6-201ENST00000479457 291 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 RN7SL459P-201ENST00000481078 302 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 AC108860.1-201ENST00000484521 383 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 Y_RNA.689-201ENST00000516589 107 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 RNU6-352P-201ENST00000516908 107 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 RN7SKP60-201ENST00000516985 239 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 RN7SKP258-201ENST00000517151 304 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 RPL7P20-201ENST00000520308 745 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 PSMA3P-201ENST00000555485 635 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 AC037471.2-201ENST00000564941 598 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 MIR5096-201ENST00000583713 70 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 AC104763.2-201ENST00000604179 382 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 AL592436.1-201ENST00000605135 558 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 AL670379.4-201ENST00000605279 254 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 BRDTP1-201ENST00000605735 677 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms