Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RNU6-1143P-201ENST00000516125 104 ntBASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 RNU6-699P-201ENST00000517081 110 ntBASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 Y_RNA.721-201ENST00000517207 102 ntBASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 AC023442.1-201ENST00000531247 422 ntBASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 AC006064.5-201ENST00000541782 248 ntBASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 AC022655.2-201ENST00000577280 318 ntBASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 AC100812.1-201ENST00000607622 580 ntBASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 MIR7151-201ENST00000617477 60 ntBASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 AL357559.1-201ENST00000622228 274 ntBASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 AC016588.2-201ENST00000632484 3021 ntBASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 SNORD3E-201ENST00000362899 217 ntBASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 RNU6-179P-201ENST00000363350 107 ntBASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 RNU6-356P-201ENST00000384140 107 ntBASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 Y_RNA.576-201ENST00000384781 102 ntBASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 RNU6-328P-201ENST00000390887 106 ntBASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 AL590704.1-201ENST00000402856 794 ntBASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 RNU2-64P-201ENST00000411315 191 ntBASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 CRYBB2P1-203ENST00000415709 538 ntBASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 RPS26P2-201ENST00000440331 348 ntBASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 AC108059.3-201ENST00000456388 214 ntBASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 RNU2-10P-201ENST00000516375 211 ntBASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 RNU6-1016P-201ENST00000516689 94 ntBASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 IGKV2D-36-201ENST00000518643 226 ntBASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 AC120057.2-201ENST00000571520 271 ntBASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 AL355812.1-201ENST00000603215 216 ntBASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 AC016727.2-201ENST00000603988 621 ntBASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 AC103705.1-201ENST00000619013 241 ntBASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 AC025034.2-201ENST00000623264 286 ntBASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 U6.114-201ENST00000636407 96 ntBASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 FAM91A3P-201ENST00000456826 2544 ntBASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.55□□□□□ -1.68
CNKSR3Q6P9H4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 AL359893.1-201ENST00000447628 1580 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 RNU6-593P-201ENST00000364716 112 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 RNU6-61P-201ENST00000365528 109 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 Y_RNA.396-201ENST00000383949 103 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 Y_RNA.447-201ENST00000384184 113 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 SNORA24.1-201ENST00000384401 135 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 Y_RNA.489-201ENST00000384410 101 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 SNORA75.6-201ENST00000391318 127 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 AL691449.1-201ENST00000426570 421 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms