Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 HSPE1P5-201ENST00000561489 272 ntBASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 AL669831.4-202ENST00000590817 238 ntBASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 7SK.7-201ENST00000603504 247 ntBASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 AL034351.1-201ENST00000605288 668 ntBASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 AC069200.1-201ENST00000609511 323 ntBASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 MAPK10-304ENST00000641341 3984 ntBASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 RNU6-263P-201ENST00000363811 107 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 RNA5SP22-201ENST00000365393 109 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 SNORA75B-201ENST00000384053 137 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 RNU6-190P-201ENST00000384154 102 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 RNU6-393P-201ENST00000384475 107 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 NDUFS5P1-201ENST00000405668 289 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 RPLP0P7-201ENST00000416050 667 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 RPL21P109-201ENST00000422213 475 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 HMGB1P25-201ENST00000468402 607 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 AC022795.1-201ENST00000473808 480 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 Y_RNA.661-201ENST00000516003 99 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 RNA5SP73-201ENST00000516744 108 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 RNU1-54P-201ENST00000517181 120 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 COX6CP5-201ENST00000527162 228 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 AC090115.3-201ENST00000553218 849 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 AL117187.1-201ENST00000555482 181 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 RPL23AP97-201ENST00000568955 471 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 AC010653.1-201ENST00000571108 881 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 MIR5685-201ENST00000579080 79 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 MIR4680-201ENST00000580906 66 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 AL606490.9-201ENST00000603331 271 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 AC022418.1-201ENST00000624118 445 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 AL137003.2-201ENST00000606924 2538 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 LINC01355-201ENST00000566551 5444 ntBASIC5.28□□□□□ -1.56
PRPF40BQ6NWY9 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 RNU6-1115P-201ENST00000362490 106 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 RNA5SP124-201ENST00000362739 110 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 Y_RNA.158-201ENST00000363651 101 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 RNU6-128P-201ENST00000383976 107 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 RNU6-434P-201ENST00000384376 107 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 SNORA74C-2-201ENST00000411179 201 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 MCFD2P1-201ENST00000417812 300 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 YME1L1P1-201ENST00000429435 297 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 AL160004.2-201ENST00000432935 350 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 CYCSP43-201ENST00000438233 310 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 AC104472.2-201ENST00000469035 601 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 RPL7P23-201ENST00000493874 747 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 RNU6-1137P-201ENST00000517073 99 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 IGKV2-23-201ENST00000518729 323 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 IGLV3-26-201ENST00000520756 302 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 AC100770.1-201ENST00000532310 322 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 AC107918.3-201ENST00000533272 382 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 AC004817.2-201ENST00000561794 651 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 MIR3149-201ENST00000584629 83 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 BNIP3P16-201ENST00000589779 534 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 IGHV3-29-201ENST00000604817 344 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 AC011890.2-201ENST00000613393 294 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 AC098657.3-201ENST00000620434 263 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 BTBD10P1-201ENST00000549824 1352 ntBASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PRPF40BQ6NWY9 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms