Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
KRT40Q6A162 MAPK10-373ENST00000641983 6772 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
KRT40Q6A162 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRT40Q6A162 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.35□□□□□ -1.71
KRT40Q6A162 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
KRT40Q6A162 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.34□□□□□ -1.71
KRT40Q6A162 Y_RNA.132-201ENST00000363421 102 ntBASIC4.34□□□□□ -1.71
KRT40Q6A162 SNORA63-201ENST00000363450 132 ntBASIC4.34□□□□□ -1.71
KRT40Q6A162 RNA5SP72-201ENST00000364442 117 ntBASIC4.34□□□□□ -1.71
KRT40Q6A162 SNORA3.3-201ENST00000408712 125 ntBASIC4.34□□□□□ -1.71
KRT40Q6A162 HMGN1P24-201ENST00000412282 298 ntBASIC4.34□□□□□ -1.71
KRT40Q6A162 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT40Q6A162 AC009161.1-201ENST00000417306 376 ntBASIC4.34□□□□□ -1.71
KRT40Q6A162 AF228730.4-201ENST00000421457 183 ntBASIC4.34□□□□□ -1.71
KRT40Q6A162 AC005094.1-201ENST00000440420 368 ntBASIC4.34□□□□□ -1.71
KRT40Q6A162 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT40Q6A162 AL162395.1-201ENST00000457882 422 ntBASIC4.34□□□□□ -1.71
KRT40Q6A162 RNU7-182P-201ENST00000459009 62 ntBASIC4.34□□□□□ -1.71
KRT40Q6A162 Y_RNA.632-201ENST00000459189 102 ntBASIC4.34□□□□□ -1.71
KRT40Q6A162 RNU7-180P-201ENST00000459240 63 ntBASIC4.34□□□□□ -1.71
KRT40Q6A162 RN7SL293P-201ENST00000481765 281 ntBASIC4.34□□□□□ -1.71
KRT40Q6A162 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.34□□□□□ -1.71
KRT40Q6A162 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT40Q6A162 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.34□□□□□ -1.71
KRT40Q6A162 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.34□□□□□ -1.71
KRT40Q6A162 RPL7P20-201ENST00000520308 745 ntBASIC4.34□□□□□ -1.71
KRT40Q6A162 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT40Q6A162 AC087499.8-201ENST00000578406 226 ntBASIC4.34□□□□□ -1.71
KRT40Q6A162 AC024619.4-201ENST00000580924 316 ntBASIC4.34□□□□□ -1.71
KRT40Q6A162 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT40Q6A162 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.34□□□□□ -1.71
KRT40Q6A162 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.34□□□□□ -1.71
KRT40Q6A162 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT40Q6A162 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.34□□□□□ -1.71
KRT40Q6A162 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.34□□□□□ -1.71
KRT40Q6A162 MTND5P1-201ENST00000445440 1375 ntBASIC4.34□□□□□ -1.71
KRT40Q6A162 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
KRT40Q6A162 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
KRT40Q6A162 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
KRT40Q6A162 AC006504.1-201ENST00000562493 3666 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.33□□□□□ -1.72
KRT40Q6A162 AL161912.2-201ENST00000565707 3007 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.33□□□□□ -1.72
KRT40Q6A162 SAGE2P-201ENST00000420011 2126 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 AL451142.2-201ENST00000429076 2090 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 TAB3P1-202ENST00000452645 1634 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.33□□□□□ -1.72
KRT40Q6A162 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
KRT40Q6A162 Y_RNA.167-201ENST00000363735 109 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 U3.12-201ENST00000364498 214 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 RNU6-1078P-201ENST00000364522 103 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 RNU6-641P-201ENST00000384006 107 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 RNU6-1029P-201ENST00000384109 107 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 RNU6-692P-201ENST00000384496 107 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
KRT40Q6A162 SNORD37.1-201ENST00000390968 65 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 AL136372.1-201ENST00000403060 228 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 RNU2-39P-201ENST00000410604 198 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 MTND1P9-201ENST00000453775 944 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 RNU7-66P-201ENST00000459469 62 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 AC007547.1-201ENST00000462177 490 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 MTND4P17-201ENST00000470444 350 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 RPL21P99-201ENST00000480369 423 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.33□□□□□ -1.72
KRT40Q6A162 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.33□□□□□ -1.72
KRT40Q6A162 FAM206BP-201ENST00000510179 541 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 RN7SKP13-201ENST00000515933 244 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 RNA5SP164-201ENST00000516533 110 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 RNU7-51P-201ENST00000516560 62 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 RN7SKP209-201ENST00000516888 304 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.33□□□□□ -1.72
KRT40Q6A162 AC007991.1-201ENST00000522680 631 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRT40Q6A162 DEFB109D-201ENST00000529497 240 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 CYCSP30-201ENST00000546447 172 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.33□□□□□ -1.72
KRT40Q6A162 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.33□□□□□ -1.72
KRT40Q6A162 MIR4703-201ENST00000577728 79 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 MIR4512-201ENST00000583257 77 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 AC020914.4-201ENST00000597690 277 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 Y_RNA.812-201ENST00000610788 101 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 Y_RNA.784-201ENST00000613803 101 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 Y_RNA.787-201ENST00000616522 101 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 Y_RNA.780-201ENST00000617336 101 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 Y_RNA.801-201ENST00000619005 101 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 FAM35DP-201ENST00000323387 2712 ntBASIC4.33□□□□□ -1.72
KRT40Q6A162 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.33□□□□□ -1.72
KRT40Q6A162 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.32□□□□□ -1.72
KRT40Q6A162 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KRT40Q6A162 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KRT40Q6A162 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRT40Q6A162 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.32□□□□□ -1.72
KRT40Q6A162 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.32□□□□□ -1.72
KRT40Q6A162 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KRT40Q6A162 RNA5SP502-201ENST00000362694 119 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 RNU6-188P-201ENST00000364207 107 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms