Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RN7SKP16-201ENST00000410180 299 ntBASIC5.93□□□□□ -1.46
RC3H1Q5TC82 AC017079.2-201ENST00000416102 485 ntBASIC5.93□□□□□ -1.46
RC3H1Q5TC82 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.93□□□□□ -1.46
RC3H1Q5TC82 RPS12P10-201ENST00000427031 377 ntBASIC5.93□□□□□ -1.46
RC3H1Q5TC82 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.93□□□□□ -1.46
RC3H1Q5TC82 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.93□□□□□ -1.46
RC3H1Q5TC82 RPL7L1P1-201ENST00000448259 785 ntBASIC5.93□□□□□ -1.46
RC3H1Q5TC82 RPL21P126-201ENST00000470049 478 ntBASIC5.93□□□□□ -1.46
RC3H1Q5TC82 AC091167.1-201ENST00000492017 396 ntBASIC5.93□□□□□ -1.46
RC3H1Q5TC82 AC010469.2-201ENST00000496412 480 ntBASIC5.93□□□□□ -1.46
RC3H1Q5TC82 AC106785.1-201ENST00000565935 262 ntBASIC5.93□□□□□ -1.46
RC3H1Q5TC82 CPDP1-201ENST00000579660 283 ntBASIC5.93□□□□□ -1.46
RC3H1Q5TC82 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.93□□□□□ -1.46
RC3H1Q5TC82 AC104465.1-201ENST00000611365 139 ntBASIC5.93□□□□□ -1.46
RC3H1Q5TC82 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.93□□□□□ -1.46
RC3H1Q5TC82 ZNF299P-201ENST00000406845 1804 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 IQCB2P-201ENST00000401788 1633 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RC3H1Q5TC82 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.92□□□□□ -1.46
RC3H1Q5TC82 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RC3H1Q5TC82 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RC3H1Q5TC82 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
RC3H1Q5TC82 Y_RNA.240-201ENST00000364469 95 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 RNU1-64P-201ENST00000365443 163 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.92□□□□□ -1.46
RC3H1Q5TC82 Y_RNA.383-201ENST00000383855 97 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 RNU6-325P-201ENST00000411132 105 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 Y_RNA.629-201ENST00000411368 105 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.92□□□□□ -1.46
RC3H1Q5TC82 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.92□□□□□ -1.46
RC3H1Q5TC82 HMGN2P27-201ENST00000427352 270 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 RPL23AP33-201ENST00000442301 452 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 AL359073.1-201ENST00000448036 403 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 AC087477.1-201ENST00000465747 340 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.92□□□□□ -1.46
RC3H1Q5TC82 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.92□□□□□ -1.46
RC3H1Q5TC82 HMGN2P13-201ENST00000476476 274 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.92□□□□□ -1.46
RC3H1Q5TC82 SNORA31.18-201ENST00000517043 134 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 RPL23AP53-201ENST00000521854 457 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 AC010186.2-204ENST00000537668 439 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 PRPF19P1-201ENST00000584766 898 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.92□□□□□ -1.46
RC3H1Q5TC82 OR1M4P-201ENST00000589199 287 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 AC007566.2-201ENST00000603642 413 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 AL596275.2-204ENST00000641628 552 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
RC3H1Q5TC82 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RC3H1Q5TC82 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RC3H1Q5TC82 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RC3H1Q5TC82 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RC3H1Q5TC82 AP002512.4-202ENST00000641599 4530 ntBASIC5.92□□□□□ -1.46
RC3H1Q5TC82 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
RC3H1Q5TC82 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RC3H1Q5TC82 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RC3H1Q5TC82 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RC3H1Q5TC82 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.91□□□□□ -1.46
RC3H1Q5TC82 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RC3H1Q5TC82 Y_RNA.143-201ENST00000363520 106 ntBASIC5.91□□□□□ -1.46
RC3H1Q5TC82 RNU6-1243P-201ENST00000364028 107 ntBASIC5.91□□□□□ -1.46
RC3H1Q5TC82 RNU6-1168P-201ENST00000390831 104 ntBASIC5.91□□□□□ -1.46
RC3H1Q5TC82 BMS1P22-201ENST00000414726 313 ntBASIC5.91□□□□□ -1.46
RC3H1Q5TC82 AC092809.3-201ENST00000415453 231 ntBASIC5.91□□□□□ -1.46
RC3H1Q5TC82 RPS23P10-201ENST00000416185 486 ntBASIC5.91□□□□□ -1.46
RC3H1Q5TC82 RPS6P12-201ENST00000432491 726 ntBASIC5.91□□□□□ -1.46
RC3H1Q5TC82 AL159987.2-201ENST00000432754 307 ntBASIC5.91□□□□□ -1.46
RC3H1Q5TC82 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.91□□□□□ -1.46
RC3H1Q5TC82 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.91□□□□□ -1.46
RC3H1Q5TC82 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.91□□□□□ -1.46
RC3H1Q5TC82 RPL21P6-201ENST00000479171 504 ntBASIC5.91□□□□□ -1.46
RC3H1Q5TC82 AC113155.1-201ENST00000511141 769 ntBASIC5.91□□□□□ -1.46
RC3H1Q5TC82 MIR2116-201ENST00000517221 80 ntBASIC5.91□□□□□ -1.46
RC3H1Q5TC82 MRPS18CP4-201ENST00000535821 231 ntBASIC5.91□□□□□ -1.46
RC3H1Q5TC82 SYF2P1-201ENST00000550658 413 ntBASIC5.91□□□□□ -1.46
RC3H1Q5TC82 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.91□□□□□ -1.46
RC3H1Q5TC82 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.91□□□□□ -1.46
RC3H1Q5TC82 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.91□□□□□ -1.46
RC3H1Q5TC82 AC005951.2-201ENST00000576282 495 ntBASIC5.91□□□□□ -1.46
RC3H1Q5TC82 MIR3976-201ENST00000606807 139 ntBASIC5.91□□□□□ -1.46
RC3H1Q5TC82 AC123768.4-201ENST00000616244 701 ntBASIC5.91□□□□□ -1.46
RC3H1Q5TC82 BX005214.3-202ENST00000619809 325 ntBASIC5.91□□□□□ -1.46
RC3H1Q5TC82 AC243829.7-201ENST00000633081 225 ntBASIC5.91□□□□□ -1.46
RC3H1Q5TC82 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.91□□□□□ -1.46
RC3H1Q5TC82 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.91□□□□□ -1.46
RC3H1Q5TC82 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
RC3H1Q5TC82 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RC3H1Q5TC82 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RC3H1Q5TC82 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.9□□□□□ -1.46
RC3H1Q5TC82 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RC3H1Q5TC82 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RC3H1Q5TC82 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.9□□□□□ -1.46
RC3H1Q5TC82 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
RC3H1Q5TC82 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RC3H1Q5TC82 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
RC3H1Q5TC82 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RC3H1Q5TC82 AL031119.1-201ENST00000404707 1879 ntBASIC5.9□□□□□ -1.46
RC3H1Q5TC82 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RC3H1Q5TC82 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms