Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL591034.1-201ENST00000407447 340 ntBASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 OR9R1P-201ENST00000412200 877 ntBASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 ARL5AP1-201ENST00000418991 388 ntBASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 AL356535.1-201ENST00000440335 398 ntBASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 AC006011.1-201ENST00000442758 349 ntBASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 AL500522.2-201ENST00000448562 343 ntBASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 AC084357.1-201ENST00000473404 255 ntBASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 TTC39CP1-201ENST00000512513 755 ntBASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 LRRC34P2-201ENST00000514850 553 ntBASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 MTND4P7-201ENST00000523876 130 ntBASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 AC107016.1-201ENST00000550463 337 ntBASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 SYF2P1-201ENST00000550658 413 ntBASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 AL138976.2-201ENST00000563989 694 ntBASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 AL357559.1-201ENST00000622228 274 ntBASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 AC012442.3-202ENST00000636742 206 ntBASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 AC099654.14-201ENST00000638599 341 ntBASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC144BQ3MJ40 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC144BQ3MJ40 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC144BQ3MJ40 AL354685.2-201ENST00000448218 1447 ntBASIC4.65□□□□□ -1.66
CCDC144BQ3MJ40 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.65□□□□□ -1.66
CCDC144BQ3MJ40 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.65□□□□□ -1.66
CCDC144BQ3MJ40 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC144BQ3MJ40 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 SNORA70.4-201ENST00000365509 134 ntBASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 RNU6-116P-201ENST00000384042 109 ntBASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 CISD1P1-201ENST00000393907 327 ntBASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 AL139397.2-201ENST00000404529 772 ntBASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 FAT1P1-201ENST00000406588 507 ntBASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 MIR1179-201ENST00000408703 91 ntBASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 AC092809.3-201ENST00000415453 231 ntBASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 PIGFP3-201ENST00000441918 722 ntBASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 AC104058.1-201ENST00000448028 297 ntBASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 AL133547.1-201ENST00000448546 220 ntBASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 EIF4EP3-201ENST00000498782 656 ntBASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 AF235103.2-201ENST00000525753 346 ntBASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 AL137161.1-201ENST00000532231 390 ntBASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 MIR15A-201ENST00000607334 83 ntBASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 uc_338.32-201ENST00000615087 172 ntBASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 AC024614.3-201ENST00000637860 256 ntBASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 ASNSP3-201ENST00000451989 1306 ntBASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC144BQ3MJ40 AC118273.1-201ENST00000525324 3006 ntBASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 AL049641.1-201ENST00000441055 1948 ntBASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 ZNF807-201ENST00000328088 1707 ntBASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 RNA5SP322-201ENST00000363617 119 ntBASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 RNU6-512P-201ENST00000364438 103 ntBASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 MIR200C-201ENST00000384980 68 ntBASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 AL590704.1-201ENST00000402856 794 ntBASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 UBE2D3P2-201ENST00000424409 445 ntBASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 GPM6BP2-201ENST00000432046 144 ntBASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 KCTD9P3-201ENST00000434597 1169 ntBASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 HSPD1P21-201ENST00000436541 245 ntBASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 HMGB1P31-201ENST00000437242 427 ntBASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 GPM6BP1-201ENST00000446387 144 ntBASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 KC877373.1-201ENST00000479066 408 ntBASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 RNU6-914P-201ENST00000516749 109 ntBASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 IGKV2-38-201ENST00000517443 247 ntBASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 BNIP3P6-201ENST00000549284 499 ntBASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 AC060780.3-201ENST00000589464 80 ntBASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.64□□□□□ -1.67
CCDC144BQ3MJ40 U6.42-201ENST00000618440 107 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms