Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AC012360.2-201ENST00000609349 391 ntBASIC2.56□□□□□ -2
CKAP4Q07065 AC090116.1-201ENST00000615679 446 ntBASIC2.56□□□□□ -2
CKAP4Q07065 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.56□□□□□ -2
CKAP4Q07065 AC004009.2-201ENST00000623016 728 ntBASIC2.56□□□□□ -2
CKAP4Q07065 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.56□□□□□ -2
CKAP4Q07065 AL356473.1-201ENST00000406203 1408 ntBASIC2.56□□□□□ -2
CKAP4Q07065 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.56□□□□□ -2
CKAP4Q07065 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
CKAP4Q07065 NUP58P1-201ENST00000502546 1738 ntBASIC2.56□□□□□ -2
CKAP4Q07065 AC080100.1-201ENST00000624239 5356 ntBASIC2.55□□□□□ -2
CKAP4Q07065 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
CKAP4Q07065 Y_RNA.97-201ENST00000363094 102 ntBASIC2.55□□□□□ -2
CKAP4Q07065 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.55□□□□□ -2
CKAP4Q07065 RNU1-138P-201ENST00000384093 164 ntBASIC2.55□□□□□ -2
CKAP4Q07065 Y_RNA.436-201ENST00000384097 102 ntBASIC2.55□□□□□ -2
CKAP4Q07065 AL031679.1-201ENST00000400616 525 ntBASIC2.55□□□□□ -2
CKAP4Q07065 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.55□□□□□ -2
CKAP4Q07065 BX682237.1-201ENST00000415016 335 ntBASIC2.55□□□□□ -2
CKAP4Q07065 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.55□□□□□ -2
CKAP4Q07065 MTCO2P5-201ENST00000422621 426 ntBASIC2.55□□□□□ -2
CKAP4Q07065 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.55□□□□□ -2
CKAP4Q07065 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.55□□□□□ -2
CKAP4Q07065 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.55□□□□□ -2
CKAP4Q07065 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.55□□□□□ -2
CKAP4Q07065 MTCO3P5-201ENST00000433620 714 ntBASIC2.55□□□□□ -2
CKAP4Q07065 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.55□□□□□ -2
CKAP4Q07065 BMI1P1-201ENST00000445879 941 ntBASIC2.55□□□□□ -2
CKAP4Q07065 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.55□□□□□ -2
CKAP4Q07065 BX322784.1-201ENST00000455793 1077 ntBASIC2.55□□□□□ -2
CKAP4Q07065 MTND4P16-201ENST00000466108 1367 ntBASIC2.55□□□□□ -2
CKAP4Q07065 AC116337.2-201ENST00000477662 156 ntBASIC2.55□□□□□ -2
CKAP4Q07065 VN1R104P-201ENST00000505115 1009 ntBASIC2.55□□□□□ -2
CKAP4Q07065 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.55□□□□□ -2
CKAP4Q07065 AC074250.1-201ENST00000511117 192 ntBASIC2.55□□□□□ -2
CKAP4Q07065 AC097714.1-201ENST00000511272 1647 ntBASIC2.55□□□□□ -2
CKAP4Q07065 AC024589.1-201ENST00000512207 263 ntBASIC2.55□□□□□ -2
CKAP4Q07065 AC022861.1-201ENST00000522981 663 ntBASIC2.55□□□□□ -2
CKAP4Q07065 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.55□□□□□ -2
CKAP4Q07065 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.55□□□□□ -2
CKAP4Q07065 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.55□□□□□ -2
CKAP4Q07065 AC091489.2-201ENST00000566263 604 ntBASIC2.55□□□□□ -2
CKAP4Q07065 AC034105.4-201ENST00000568304 277 ntBASIC2.55□□□□□ -2
CKAP4Q07065 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.55□□□□□ -2
CKAP4Q07065 AL353997.4-201ENST00000586196 166 ntBASIC2.55□□□□□ -2
CKAP4Q07065 AC012493.2-201ENST00000595083 291 ntBASIC2.55□□□□□ -2
CKAP4Q07065 AC025588.3-201ENST00000604182 274 ntBASIC2.55□□□□□ -2
CKAP4Q07065 AC025594.3-201ENST00000613068 790 ntBASIC2.55□□□□□ -2
CKAP4Q07065 AC073968.1-201ENST00000618594 637 ntBASIC2.55□□□□□ -2
CKAP4Q07065 AC012314.7-201ENST00000619693 93 ntBASIC2.55□□□□□ -2
CKAP4Q07065 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.55□□□□□ -2
CKAP4Q07065 AC244517.1-201ENST00000606030 2086 ntBASIC2.54□□□□□ -2
CKAP4Q07065 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.54□□□□□ -2
CKAP4Q07065 PABPC1P9-201ENST00000426076 1612 ntBASIC2.54□□□□□ -2
CKAP4Q07065 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
CKAP4Q07065 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.54□□□□□ -2
CKAP4Q07065 U3.4-201ENST00000363352 213 ntBASIC2.54□□□□□ -2
CKAP4Q07065 Y_RNA.126-201ENST00000363382 111 ntBASIC2.54□□□□□ -2
CKAP4Q07065 RNU4-91P-201ENST00000364778 135 ntBASIC2.54□□□□□ -2
CKAP4Q07065 SNORD82-201ENST00000365530 70 ntBASIC2.54□□□□□ -2
CKAP4Q07065 RNU6-878P-201ENST00000384578 110 ntBASIC2.54□□□□□ -2
CKAP4Q07065 SNORD116-4-201ENST00000384733 96 ntBASIC2.54□□□□□ -2
CKAP4Q07065 U3.29-201ENST00000391296 212 ntBASIC2.54□□□□□ -2
CKAP4Q07065 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.54□□□□□ -2
CKAP4Q07065 MIR1305-201ENST00000408300 86 ntBASIC2.54□□□□□ -2
CKAP4Q07065 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.54□□□□□ -2
CKAP4Q07065 HMGB1P11-201ENST00000413899 637 ntBASIC2.54□□□□□ -2
CKAP4Q07065 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.54□□□□□ -2
CKAP4Q07065 AC007742.1-201ENST00000425789 329 ntBASIC2.54□□□□□ -2
CKAP4Q07065 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.54□□□□□ -2
CKAP4Q07065 AL445669.1-201ENST00000426743 755 ntBASIC2.54□□□□□ -2
CKAP4Q07065 AL590233.1-201ENST00000430017 456 ntBASIC2.54□□□□□ -2
CKAP4Q07065 ELOCP26-201ENST00000436067 329 ntBASIC2.54□□□□□ -2
CKAP4Q07065 AL353706.1-201ENST00000436728 494 ntBASIC2.54□□□□□ -2
CKAP4Q07065 RSU1P2-202ENST00000437884 485 ntBASIC2.54□□□□□ -2
CKAP4Q07065 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.54□□□□□ -2
CKAP4Q07065 AL135938.1-201ENST00000443141 297 ntBASIC2.54□□□□□ -2
CKAP4Q07065 MTCO2P7-201ENST00000446518 666 ntBASIC2.54□□□□□ -2
CKAP4Q07065 AC002381.1-201ENST00000447049 280 ntBASIC2.54□□□□□ -2
CKAP4Q07065 AC005297.2-201ENST00000450430 606 ntBASIC2.54□□□□□ -2
CKAP4Q07065 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.54□□□□□ -2
CKAP4Q07065 AP000852.1-201ENST00000472460 573 ntBASIC2.54□□□□□ -2
CKAP4Q07065 RPL23AP45-201ENST00000476406 468 ntBASIC2.54□□□□□ -2
CKAP4Q07065 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.54□□□□□ -2
CKAP4Q07065 AC022447.3-201ENST00000506865 495 ntBASIC2.54□□□□□ -2
CKAP4Q07065 RAC1P5-201ENST00000512182 576 ntBASIC2.54□□□□□ -2
CKAP4Q07065 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.54□□□□□ -2
CKAP4Q07065 Y_RNA.695-201ENST00000516715 107 ntBASIC2.54□□□□□ -2
CKAP4Q07065 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.54□□□□□ -2
CKAP4Q07065 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.54□□□□□ -2
CKAP4Q07065 AP001804.3-201ENST00000525146 880 ntBASIC2.54□□□□□ -2
CKAP4Q07065 AP004247.1-201ENST00000531556 1289 ntBASIC2.54□□□□□ -2
CKAP4Q07065 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.54□□□□□ -2
CKAP4Q07065 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.54□□□□□ -2
CKAP4Q07065 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.54□□□□□ -2
CKAP4Q07065 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.54□□□□□ -2
CKAP4Q07065 RPL23AP84-201ENST00000571193 464 ntBASIC2.54□□□□□ -2
CKAP4Q07065 MIR544B-201ENST00000582372 78 ntBASIC2.54□□□□□ -2
CKAP4Q07065 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.54□□□□□ -2
CKAP4Q07065 AC010620.2-201ENST00000600135 313 ntBASIC2.54□□□□□ -2
CKAP4Q07065 AC073544.2-201ENST00000601155 540 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms