Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 HMGB3P26-201ENST00000560051 582 ntBASIC4.4□□□□□ -1.71
YBX1P67809 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.4□□□□□ -1.71
YBX1P67809 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.4□□□□□ -1.71
YBX1P67809 MTND4LP5-201ENST00000605152 292 ntBASIC4.4□□□□□ -1.71
YBX1P67809 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
YBX1P67809 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
YBX1P67809 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.4□□□□□ -1.71
YBX1P67809 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.4□□□□□ -1.71
YBX1P67809 DDX10P1-201ENST00000448545 1933 ntBASIC4.4□□□□□ -1.71
YBX1P67809 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
YBX1P67809 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
YBX1P67809 AC009951.1-201ENST00000623674 2614 ntBASIC4.4□□□□□ -1.71
YBX1P67809 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
YBX1P67809 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
YBX1P67809 AC068254.2-201ENST00000623938 3577 ntBASIC4.39□□□□□ -1.71
YBX1P67809 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.39□□□□□ -1.71
YBX1P67809 AL137003.2-201ENST00000606924 2538 ntBASIC4.39□□□□□ -1.71
YBX1P67809 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.39□□□□□ -1.71
YBX1P67809 AC138393.1-203ENST00000327086 343 ntBASIC4.39□□□□□ -1.71
YBX1P67809 SNORA23-201ENST00000365128 182 ntBASIC4.39□□□□□ -1.71
YBX1P67809 RNU6-842P-201ENST00000384269 107 ntBASIC4.39□□□□□ -1.71
YBX1P67809 RNU6-472P-201ENST00000384299 107 ntBASIC4.39□□□□□ -1.71
YBX1P67809 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
YBX1P67809 ENSAP1-201ENST00000392855 326 ntBASIC4.39□□□□□ -1.71
YBX1P67809 MIR1250-201ENST00000408098 113 ntBASIC4.39□□□□□ -1.71
YBX1P67809 AC009237.10-201ENST00000414112 510 ntBASIC4.39□□□□□ -1.71
YBX1P67809 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.39□□□□□ -1.71
YBX1P67809 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.39□□□□□ -1.71
YBX1P67809 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.39□□□□□ -1.71
YBX1P67809 AL591704.1-201ENST00000432574 275 ntBASIC4.39□□□□□ -1.71
YBX1P67809 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.39□□□□□ -1.71
YBX1P67809 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.39□□□□□ -1.71
YBX1P67809 AL162389.1-201ENST00000449233 177 ntBASIC4.39□□□□□ -1.71
YBX1P67809 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.39□□□□□ -1.71
YBX1P67809 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.39□□□□□ -1.71
YBX1P67809 VN1R105P-201ENST00000486595 910 ntBASIC4.39□□□□□ -1.71
YBX1P67809 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.39□□□□□ -1.71
YBX1P67809 AC105758.1-201ENST00000506038 399 ntBASIC4.39□□□□□ -1.71
YBX1P67809 FTH1P9-201ENST00000513251 355 ntBASIC4.39□□□□□ -1.71
YBX1P67809 RN7SKP40-201ENST00000517211 242 ntBASIC4.39□□□□□ -1.71
YBX1P67809 RPL7P50-201ENST00000600588 727 ntBASIC4.39□□□□□ -1.71
YBX1P67809 AC141273.2-201ENST00000618989 130 ntBASIC4.39□□□□□ -1.71
YBX1P67809 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.39□□□□□ -1.71
YBX1P67809 AL596275.2-204ENST00000641628 552 ntBASIC4.39□□□□□ -1.71
YBX1P67809 AL596275.2-206ENST00000641957 626 ntBASIC4.39□□□□□ -1.71
YBX1P67809 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
YBX1P67809 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
YBX1P67809 AC010615.1-201ENST00000594254 1764 ntBASIC4.39□□□□□ -1.71
YBX1P67809 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
YBX1P67809 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
YBX1P67809 LINC01109-201ENST00000603837 3081 ntBASIC4.39□□□□□ -1.71
YBX1P67809 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
YBX1P67809 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
YBX1P67809 ZNF72P-201ENST00000425869 1908 ntBASIC4.38□□□□□ -1.71
YBX1P67809 HSPA8P4-201ENST00000511877 1920 ntBASIC4.38□□□□□ -1.71
YBX1P67809 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
YBX1P67809 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
YBX1P67809 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
YBX1P67809 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
YBX1P67809 AC233263.6-201ENST00000631132 1963 ntBASIC4.38□□□□□ -1.71
YBX1P67809 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
YBX1P67809 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
YBX1P67809 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
YBX1P67809 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.38□□□□□ -1.71
YBX1P67809 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
YBX1P67809 Y_RNA.126-201ENST00000363382 111 ntBASIC4.38□□□□□ -1.71
YBX1P67809 Y_RNA.222-201ENST00000364264 102 ntBASIC4.38□□□□□ -1.71
YBX1P67809 RNU6-1062P-201ENST00000383908 107 ntBASIC4.38□□□□□ -1.71
YBX1P67809 RNU6-190P-201ENST00000384154 102 ntBASIC4.38□□□□□ -1.71
YBX1P67809 MT-TC-201ENST00000387405 66 ntBASIC4.38□□□□□ -1.71
YBX1P67809 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.38□□□□□ -1.71
YBX1P67809 RPL21P1-201ENST00000399532 476 ntBASIC4.38□□□□□ -1.71
YBX1P67809 AC097374.1-203ENST00000400783 485 ntBASIC4.38□□□□□ -1.71
YBX1P67809 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.38□□□□□ -1.71
YBX1P67809 AL645568.3-201ENST00000433683 316 ntBASIC4.38□□□□□ -1.71
YBX1P67809 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.38□□□□□ -1.71
YBX1P67809 AC011816.1-201ENST00000441346 546 ntBASIC4.38□□□□□ -1.71
YBX1P67809 FTH1P25-201ENST00000447665 469 ntBASIC4.38□□□□□ -1.71
YBX1P67809 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.38□□□□□ -1.71
YBX1P67809 AC133473.1-201ENST00000455173 299 ntBASIC4.38□□□□□ -1.71
YBX1P67809 SNORD127-201ENST00000458892 86 ntBASIC4.38□□□□□ -1.71
YBX1P67809 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.38□□□□□ -1.71
YBX1P67809 RN7SL604P-201ENST00000492589 296 ntBASIC4.38□□□□□ -1.71
YBX1P67809 Y_RNA.715-201ENST00000517082 110 ntBASIC4.38□□□□□ -1.71
YBX1P67809 RN7SKP92-201ENST00000517266 244 ntBASIC4.38□□□□□ -1.71
YBX1P67809 AC103783.1-201ENST00000520506 373 ntBASIC4.38□□□□□ -1.71
YBX1P67809 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.38□□□□□ -1.71
YBX1P67809 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.38□□□□□ -1.71
YBX1P67809 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.38□□□□□ -1.71
YBX1P67809 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.38□□□□□ -1.71
YBX1P67809 SUB1P3-201ENST00000564581 315 ntBASIC4.38□□□□□ -1.71
YBX1P67809 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.38□□□□□ -1.71
YBX1P67809 MIR3128-201ENST00000581957 66 ntBASIC4.38□□□□□ -1.71
YBX1P67809 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.38□□□□□ -1.71
YBX1P67809 AC103858.2-201ENST00000621471 543 ntBASIC4.38□□□□□ -1.71
YBX1P67809 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
YBX1P67809 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.38□□□□□ -1.71
YBX1P67809 IQCB2P-201ENST00000401788 1633 ntBASIC4.38□□□□□ -1.71
YBX1P67809 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.38□□□□□ -1.71
YBX1P67809 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms