Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AC106900.2-201ENST00000604994 317 ntBASIC2.04□□□□□ -2.08
COL18A1P39060 AC026741.1-201ENST00000605892 482 ntBASIC2.04□□□□□ -2.08
COL18A1P39060 AC011890.2-201ENST00000613393 294 ntBASIC2.04□□□□□ -2.08
COL18A1P39060 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
COL18A1P39060 AC091925.2-201ENST00000625059 256 ntBASIC2.04□□□□□ -2.08
COL18A1P39060 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.03□□□□□ -2.08
COL18A1P39060 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
COL18A1P39060 RNU6-1066P-201ENST00000363573 105 ntBASIC2.03□□□□□ -2.08
COL18A1P39060 CD24P4-201ENST00000382840 243 ntBASIC2.03□□□□□ -2.08
COL18A1P39060 BX664727.1-201ENST00000416024 466 ntBASIC2.03□□□□□ -2.08
COL18A1P39060 AL357078.2-201ENST00000416486 427 ntBASIC2.03□□□□□ -2.08
COL18A1P39060 SSXP9-201ENST00000417503 292 ntBASIC2.03□□□□□ -2.08
COL18A1P39060 TMEM167AP1-201ENST00000423409 219 ntBASIC2.03□□□□□ -2.08
COL18A1P39060 UBE2V1P6-201ENST00000430840 422 ntBASIC2.03□□□□□ -2.08
COL18A1P39060 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.03□□□□□ -2.08
COL18A1P39060 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
COL18A1P39060 AL031659.1-201ENST00000447075 539 ntBASIC2.03□□□□□ -2.08
COL18A1P39060 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.03□□□□□ -2.08
COL18A1P39060 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.03□□□□□ -2.08
COL18A1P39060 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.03□□□□□ -2.08
COL18A1P39060 MIR3935-201ENST00000583472 104 ntBASIC2.03□□□□□ -2.08
COL18A1P39060 AC012669.1-201ENST00000603209 283 ntBASIC2.03□□□□□ -2.08
COL18A1P39060 AC106791.2-201ENST00000604680 391 ntBASIC2.03□□□□□ -2.08
COL18A1P39060 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.03□□□□□ -2.08
COL18A1P39060 AL513185.3-201ENST00000433335 1300 ntBASIC2.03□□□□□ -2.08
COL18A1P39060 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
COL18A1P39060 AC006026.1-201ENST00000444025 1803 ntBASIC2.03□□□□□ -2.08
COL18A1P39060 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
COL18A1P39060 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.09
COL18A1P39060 MIR96-201ENST00000362288 78 ntBASIC2.03□□□□□ -2.09
COL18A1P39060 RNU6-609P-201ENST00000365459 107 ntBASIC2.03□□□□□ -2.09
COL18A1P39060 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
COL18A1P39060 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.03□□□□□ -2.09
COL18A1P39060 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.03□□□□□ -2.09
COL18A1P39060 AC092447.6-201ENST00000414578 210 ntBASIC2.03□□□□□ -2.09
COL18A1P39060 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.03□□□□□ -2.09
COL18A1P39060 FCF1P2-201ENST00000415284 583 ntBASIC2.03□□□□□ -2.09
COL18A1P39060 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.03□□□□□ -2.09
COL18A1P39060 AL589880.1-201ENST00000448271 287 ntBASIC2.03□□□□□ -2.09
COL18A1P39060 RPS29P29-201ENST00000456396 171 ntBASIC2.03□□□□□ -2.09
COL18A1P39060 RNU7-140P-201ENST00000459546 60 ntBASIC2.03□□□□□ -2.09
COL18A1P39060 RPL30P14-201ENST00000482744 348 ntBASIC2.03□□□□□ -2.09
COL18A1P39060 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.03□□□□□ -2.09
COL18A1P39060 AC010625.1-201ENST00000511296 403 ntBASIC2.03□□□□□ -2.09
COL18A1P39060 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.03□□□□□ -2.09
COL18A1P39060 MED28P6-201ENST00000558776 231 ntBASIC2.03□□□□□ -2.09
COL18A1P39060 MTCO3P24-201ENST00000572729 782 ntBASIC2.03□□□□□ -2.09
COL18A1P39060 MIR4789-201ENST00000577469 82 ntBASIC2.03□□□□□ -2.09
COL18A1P39060 AC245036.5-201ENST00000596330 847 ntBASIC2.03□□□□□ -2.09
COL18A1P39060 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.03□□□□□ -2.09
COL18A1P39060 MIR8084-201ENST00000614105 89 ntBASIC2.03□□□□□ -2.09
COL18A1P39060 AC099654.7-201ENST00000635788 2127 ntBASIC2.03□□□□□ -2.09
COL18A1P39060 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.02□□□□□ -2.09
COL18A1P39060 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.02□□□□□ -2.09
COL18A1P39060 RNU6-353P-201ENST00000364266 108 ntBASIC2.02□□□□□ -2.09
COL18A1P39060 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
COL18A1P39060 MIR517C-201ENST00000385103 95 ntBASIC2.02□□□□□ -2.09
COL18A1P39060 U3.29-201ENST00000391296 212 ntBASIC2.02□□□□□ -2.09
COL18A1P39060 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL18A1P39060 RNA5SP38-201ENST00000410750 119 ntBASIC2.02□□□□□ -2.09
COL18A1P39060 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.02□□□□□ -2.09
COL18A1P39060 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.02□□□□□ -2.09
COL18A1P39060 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.02□□□□□ -2.09
COL18A1P39060 AC009474.2-201ENST00000451383 136 ntBASIC2.02□□□□□ -2.09
COL18A1P39060 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.02□□□□□ -2.09
COL18A1P39060 ATP5EP1-201ENST00000510257 156 ntBASIC2.02□□□□□ -2.09
COL18A1P39060 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.02□□□□□ -2.09
COL18A1P39060 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.02□□□□□ -2.09
COL18A1P39060 AC090502.2-201ENST00000549267 280 ntBASIC2.02□□□□□ -2.09
COL18A1P39060 MTCYBP27-201ENST00000555160 670 ntBASIC2.02□□□□□ -2.09
COL18A1P39060 SULT1C2P1-202ENST00000562418 459 ntBASIC2.02□□□□□ -2.09
COL18A1P39060 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
COL18A1P39060 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.02□□□□□ -2.09
COL18A1P39060 AC002487.1-201ENST00000604565 994 ntBASIC2.02□□□□□ -2.09
COL18A1P39060 AL021368.1-201ENST00000607490 540 ntBASIC2.02□□□□□ -2.09
COL18A1P39060 AP002826.1-201ENST00000608835 315 ntBASIC2.02□□□□□ -2.09
COL18A1P39060 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL18A1P39060 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
COL18A1P39060 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
COL18A1P39060 RNU5D-1-201ENST00000363299 116 ntBASIC2.01□□□□□ -2.09
COL18A1P39060 SNRPEP2-201ENST00000397592 279 ntBASIC2.01□□□□□ -2.09
COL18A1P39060 AL133264.1-201ENST00000407157 562 ntBASIC2.01□□□□□ -2.09
COL18A1P39060 AL139098.1-201ENST00000407291 389 ntBASIC2.01□□□□□ -2.09
COL18A1P39060 PTGES3P2-201ENST00000407942 482 ntBASIC2.01□□□□□ -2.09
COL18A1P39060 RNU2-15P-201ENST00000410692 191 ntBASIC2.01□□□□□ -2.09
COL18A1P39060 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.01□□□□□ -2.09
COL18A1P39060 TAF13P2-201ENST00000416876 286 ntBASIC2.01□□□□□ -2.09
COL18A1P39060 MTCO1P48-201ENST00000448024 1096 ntBASIC2.01□□□□□ -2.09
COL18A1P39060 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.01□□□□□ -2.09
COL18A1P39060 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.01□□□□□ -2.09
COL18A1P39060 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.01□□□□□ -2.09
COL18A1P39060 RPS15AP17-201ENST00000470598 390 ntBASIC2.01□□□□□ -2.09
COL18A1P39060 RPS29P20-201ENST00000489592 171 ntBASIC2.01□□□□□ -2.09
COL18A1P39060 BOLA3P3-201ENST00000505182 232 ntBASIC2.01□□□□□ -2.09
COL18A1P39060 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.01□□□□□ -2.09
COL18A1P39060 HSPE1P20-201ENST00000538133 289 ntBASIC2.01□□□□□ -2.09
COL18A1P39060 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.01□□□□□ -2.09
COL18A1P39060 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.01□□□□□ -2.09
COL18A1P39060 MTCO1P40-201ENST00000574371 625 ntBASIC2.01□□□□□ -2.09
COL18A1P39060 MIR4448-201ENST00000584360 86 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms