Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC026801.2-201ENST00000515352 425 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 SNORA70.16-201ENST00000516390 95 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 MTND1P35-201ENST00000526739 508 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXD12P35452 AL512310.1-201ENST00000548639 172 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXD12P35452 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXD12P35452 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXD12P35452 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXD12P35452 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXD12P35452 AC098848.2-201ENST00000588023 330 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 AP001429.1-201ENST00000602568 530 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXD12P35452 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXD12P35452 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXD12P35452 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXD12P35452 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXD12P35452 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
HOXD12P35452 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXD12P35452 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXD12P35452 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXD12P35452 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HOXD12P35452 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HOXD12P35452 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXD12P35452 RNU6-1120P-201ENST00000362988 108 ntBASIC3.79□□□□□ -1.8
HOXD12P35452 SNORD56.2-201ENST00000363242 71 ntBASIC3.79□□□□□ -1.8
HOXD12P35452 RNU6-1097P-201ENST00000363586 107 ntBASIC3.79□□□□□ -1.8
HOXD12P35452 RNU6-867P-201ENST00000364956 107 ntBASIC3.79□□□□□ -1.8
HOXD12P35452 RNU6-108P-201ENST00000365558 107 ntBASIC3.79□□□□□ -1.8
HOXD12P35452 SNORA1.3-201ENST00000384676 136 ntBASIC3.79□□□□□ -1.8
HOXD12P35452 MIR493-201ENST00000385254 89 ntBASIC3.79□□□□□ -1.8
HOXD12P35452 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXD12P35452 U3.42-201ENST00000408746 214 ntBASIC3.79□□□□□ -1.8
HOXD12P35452 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXD12P35452 AL158156.1-201ENST00000422509 473 ntBASIC3.79□□□□□ -1.8
HOXD12P35452 RPL7P54-201ENST00000438336 674 ntBASIC3.79□□□□□ -1.8
HOXD12P35452 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXD12P35452 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXD12P35452 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXD12P35452 SCARNA24.1-201ENST00000516465 137 ntBASIC3.79□□□□□ -1.8
HOXD12P35452 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXD12P35452 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXD12P35452 HMGN1P28-201ENST00000521340 364 ntBASIC3.79□□□□□ -1.8
HOXD12P35452 AC007991.1-201ENST00000522680 631 ntBASIC3.79□□□□□ -1.8
HOXD12P35452 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXD12P35452 AC011979.2-201ENST00000527568 352 ntBASIC3.79□□□□□ -1.8
HOXD12P35452 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.79□□□□□ -1.8
HOXD12P35452 AC025449.1-201ENST00000603896 529 ntBASIC3.79□□□□□ -1.8
HOXD12P35452 AP001330.5-201ENST00000607176 411 ntBASIC3.79□□□□□ -1.8
HOXD12P35452 AC103710.2-201ENST00000609912 942 ntBASIC3.79□□□□□ -1.8
HOXD12P35452 AC243312.2-201ENST00000623340 601 ntBASIC3.79□□□□□ -1.8
HOXD12P35452 AL136313.1-201ENST00000624804 202 ntBASIC3.79□□□□□ -1.8
HOXD12P35452 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXD12P35452 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXD12P35452 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HOXD12P35452 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXD12P35452 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXD12P35452 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXD12P35452 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD12P35452 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD12P35452 AC008568.2-201ENST00000623862 2313 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXD12P35452 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD12P35452 U3.11-201ENST00000364476 212 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 Y_RNA.295-201ENST00000364918 102 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 Y_RNA.381-201ENST00000365666 102 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD12P35452 RNU1-39P-201ENST00000383897 165 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 RNU6-754P-201ENST00000391166 107 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 AC068050.1-201ENST00000394891 380 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 RNU6-1077P-201ENST00000410506 102 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 Z92545.1-201ENST00000411782 234 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXD12P35452 CYCSP4-201ENST00000429682 331 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXD12P35452 ATP5HP2-201ENST00000433885 485 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 HMGB1P37-201ENST00000439613 609 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 BNIP3P2-201ENST00000441221 577 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXD12P35452 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXD12P35452 RPL21P23-201ENST00000446654 460 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXD12P35452 AC140076.1-201ENST00000449897 361 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXD12P35452 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXD12P35452 RN7SL601P-201ENST00000471221 293 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 AC069439.1-201ENST00000494739 167 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXD12P35452 RNU6-711P-201ENST00000517255 106 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 AP003072.2-201ENST00000527756 676 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXD12P35452 AC104383.1-201ENST00000530297 370 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXD12P35452 AL359212.1-201ENST00000556608 614 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXD12P35452 AC037471.2-201ENST00000564941 598 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXD12P35452 GLUD1P4-201ENST00000590914 418 ntBASIC3.78□□□□□ -1.8
HOXD12P35452 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXD12P35452 AC093838.1-201ENST00000613014 469 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms