Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 RPS4XP13-201ENST00000483219 789 ntBASIC4.17□□□□□ -1.74
XPAP23025 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.17□□□□□ -1.74
XPAP23025 AC106872.2-201ENST00000494303 480 ntBASIC4.17□□□□□ -1.74
XPAP23025 Y_RNA.654-201ENST00000497848 106 ntBASIC4.17□□□□□ -1.74
XPAP23025 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.17□□□□□ -1.74
XPAP23025 SNORA19.2-201ENST00000516013 114 ntBASIC4.17□□□□□ -1.74
XPAP23025 RNA5SP315-201ENST00000516340 116 ntBASIC4.17□□□□□ -1.74
XPAP23025 RNU6-273P-201ENST00000516937 96 ntBASIC4.17□□□□□ -1.74
XPAP23025 RNA5SP312-201ENST00000517068 116 ntBASIC4.17□□□□□ -1.74
XPAP23025 RNU6-840P-201ENST00000517275 65 ntBASIC4.17□□□□□ -1.74
XPAP23025 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.17□□□□□ -1.74
XPAP23025 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.17□□□□□ -1.74
XPAP23025 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.17□□□□□ -1.74
XPAP23025 AL133255.1-201ENST00000606374 441 ntBASIC4.17□□□□□ -1.74
XPAP23025 Z82243.1-201ENST00000609432 473 ntBASIC4.17□□□□□ -1.74
XPAP23025 SDR42E1P2-201ENST00000614861 481 ntBASIC4.17□□□□□ -1.74
XPAP23025 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.17□□□□□ -1.74
XPAP23025 RMST_9.1-201ENST00000619945 193 ntBASIC4.17□□□□□ -1.74
XPAP23025 AC007998.5-201ENST00000622938 237 ntBASIC4.17□□□□□ -1.74
XPAP23025 AP003400.5-201ENST00000624827 617 ntBASIC4.17□□□□□ -1.74
XPAP23025 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.17□□□□□ -1.74
XPAP23025 MAPK10-372ENST00000641954 3413 ntBASIC4.17□□□□□ -1.74
XPAP23025 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
XPAP23025 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
XPAP23025 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
XPAP23025 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
XPAP23025 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
XPAP23025 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
XPAP23025 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.16□□□□□ -1.74
XPAP23025 SNORA60-201ENST00000362396 134 ntBASIC4.16□□□□□ -1.74
XPAP23025 RNU6-288P-201ENST00000363690 104 ntBASIC4.16□□□□□ -1.74
XPAP23025 RNA5SP130-201ENST00000364431 114 ntBASIC4.16□□□□□ -1.74
XPAP23025 Y_RNA.530-201ENST00000384587 101 ntBASIC4.16□□□□□ -1.74
XPAP23025 RNU6-387P-201ENST00000411331 105 ntBASIC4.16□□□□□ -1.74
XPAP23025 AL354751.2-201ENST00000415471 210 ntBASIC4.16□□□□□ -1.74
XPAP23025 RAC1P3-201ENST00000416129 580 ntBASIC4.16□□□□□ -1.74
XPAP23025 MTCO1P39-201ENST00000426148 480 ntBASIC4.16□□□□□ -1.74
XPAP23025 AL121871.1-201ENST00000443413 436 ntBASIC4.16□□□□□ -1.74
XPAP23025 HSFY6P-201ENST00000445573 403 ntBASIC4.16□□□□□ -1.74
XPAP23025 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.16□□□□□ -1.74
XPAP23025 HMGN2P7-201ENST00000456186 273 ntBASIC4.16□□□□□ -1.74
XPAP23025 RPL7P43-201ENST00000478876 753 ntBASIC4.16□□□□□ -1.74
XPAP23025 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.16□□□□□ -1.74
XPAP23025 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.16□□□□□ -1.74
XPAP23025 HMGB1P22-201ENST00000505315 124 ntBASIC4.16□□□□□ -1.74
XPAP23025 RNU6-864P-201ENST00000516256 108 ntBASIC4.16□□□□□ -1.74
XPAP23025 RNU6-1088P-201ENST00000516850 104 ntBASIC4.16□□□□□ -1.74
XPAP23025 RN7SKP60-201ENST00000516985 239 ntBASIC4.16□□□□□ -1.74
XPAP23025 OR11H5P-201ENST00000554039 926 ntBASIC4.16□□□□□ -1.74
XPAP23025 MIR3690-201ENST00000580266 75 ntBASIC4.16□□□□□ -1.74
XPAP23025 RN7SL600P-201ENST00000581811 299 ntBASIC4.16□□□□□ -1.74
XPAP23025 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.16□□□□□ -1.74
XPAP23025 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.16□□□□□ -1.74
XPAP23025 AC092747.3-201ENST00000603769 301 ntBASIC4.16□□□□□ -1.74
XPAP23025 AL365204.3-201ENST00000612448 685 ntBASIC4.16□□□□□ -1.74
XPAP23025 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.16□□□□□ -1.74
XPAP23025 AL160413.1-201ENST00000622780 310 ntBASIC4.16□□□□□ -1.74
XPAP23025 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
XPAP23025 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
XPAP23025 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
XPAP23025 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
XPAP23025 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
XPAP23025 AC103710.2-202ENST00000641454 2853 ntBASIC4.15□□□□□ -1.74
XPAP23025 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.15□□□□□ -1.75
XPAP23025 RNU1-108P-201ENST00000362556 161 ntBASIC4.15□□□□□ -1.75
XPAP23025 SNORD35B-201ENST00000363660 87 ntBASIC4.15□□□□□ -1.75
XPAP23025 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
XPAP23025 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
XPAP23025 SNORA36C-201ENST00000384289 132 ntBASIC4.15□□□□□ -1.75
XPAP23025 RNU1-13P-201ENST00000384499 162 ntBASIC4.15□□□□□ -1.75
XPAP23025 CISD1P1-201ENST00000393907 327 ntBASIC4.15□□□□□ -1.75
XPAP23025 AL139039.1-201ENST00000401900 692 ntBASIC4.15□□□□□ -1.75
XPAP23025 RPL21P65-201ENST00000406094 466 ntBASIC4.15□□□□□ -1.75
XPAP23025 MIR1193-201ENST00000408109 78 ntBASIC4.15□□□□□ -1.75
XPAP23025 POLHP1-201ENST00000411806 470 ntBASIC4.15□□□□□ -1.75
XPAP23025 ARL5AP1-201ENST00000418991 388 ntBASIC4.15□□□□□ -1.75
XPAP23025 USP9YP20-201ENST00000419224 558 ntBASIC4.15□□□□□ -1.75
XPAP23025 CYP4F29P-201ENST00000420685 446 ntBASIC4.15□□□□□ -1.75
XPAP23025 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.15□□□□□ -1.75
XPAP23025 CALM2P2-201ENST00000428512 440 ntBASIC4.15□□□□□ -1.75
XPAP23025 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.15□□□□□ -1.75
XPAP23025 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.15□□□□□ -1.75
XPAP23025 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.15□□□□□ -1.75
XPAP23025 AC006011.1-201ENST00000442758 349 ntBASIC4.15□□□□□ -1.75
XPAP23025 CEACAMP4-201ENST00000457676 421 ntBASIC4.15□□□□□ -1.75
XPAP23025 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.15□□□□□ -1.75
XPAP23025 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.15□□□□□ -1.75
XPAP23025 ERHP1-201ENST00000523006 310 ntBASIC4.15□□□□□ -1.75
XPAP23025 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.15□□□□□ -1.75
XPAP23025 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.15□□□□□ -1.75
XPAP23025 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.15□□□□□ -1.75
XPAP23025 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.15□□□□□ -1.75
XPAP23025 AC015813.4-201ENST00000610469 179 ntBASIC4.15□□□□□ -1.75
XPAP23025 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.15□□□□□ -1.75
XPAP23025 uc_338.15-201ENST00000615470 191 ntBASIC4.15□□□□□ -1.75
XPAP23025 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.15□□□□□ -1.75
XPAP23025 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
XPAP23025 AC066616.2-201ENST00000559334 1481 ntBASIC4.15□□□□□ -1.75
XPAP23025 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
XPAP23025 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms