Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.05□□□□□ -1.6
RARAP10276 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RARAP10276 MIR335-201ENST00000362173 94 ntBASIC5.05□□□□□ -1.6
RARAP10276 RNU1-76P-201ENST00000362903 159 ntBASIC5.05□□□□□ -1.6
RARAP10276 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RARAP10276 Y_RNA.592-201ENST00000410274 109 ntBASIC5.05□□□□□ -1.6
RARAP10276 DPPA2P3-201ENST00000411853 655 ntBASIC5.05□□□□□ -1.6
RARAP10276 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.05□□□□□ -1.6
RARAP10276 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RARAP10276 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.05□□□□□ -1.6
RARAP10276 AC092573.2-201ENST00000434546 243 ntBASIC5.05□□□□□ -1.6
RARAP10276 AC104332.1-201ENST00000440471 797 ntBASIC5.05□□□□□ -1.6
RARAP10276 RANP8-201ENST00000444720 713 ntBASIC5.05□□□□□ -1.6
RARAP10276 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RARAP10276 RN7SL558P-201ENST00000497468 299 ntBASIC5.05□□□□□ -1.6
RARAP10276 SUMO2P6-201ENST00000505273 288 ntBASIC5.05□□□□□ -1.6
RARAP10276 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.05□□□□□ -1.6
RARAP10276 AL671862.1-201ENST00000515851 349 ntBASIC5.05□□□□□ -1.6
RARAP10276 RN7SKP234-201ENST00000517173 224 ntBASIC5.05□□□□□ -1.6
RARAP10276 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.05□□□□□ -1.6
RARAP10276 AC022790.1-201ENST00000522872 204 ntBASIC5.05□□□□□ -1.6
RARAP10276 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RARAP10276 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.05□□□□□ -1.6
RARAP10276 AMZ2P1-203ENST00000565833 850 ntBASIC5.05□□□□□ -1.6
RARAP10276 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.05□□□□□ -1.6
RARAP10276 BDH2P1-201ENST00000602288 736 ntBASIC5.05□□□□□ -1.6
RARAP10276 AC211433.2-201ENST00000608433 387 ntBASIC5.05□□□□□ -1.6
RARAP10276 AC004792.1-201ENST00000614523 137 ntBASIC5.05□□□□□ -1.6
RARAP10276 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.05□□□□□ -1.6
RARAP10276 AC091903.1-201ENST00000624322 454 ntBASIC5.05□□□□□ -1.6
RARAP10276 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.05□□□□□ -1.6
RARAP10276 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RARAP10276 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.05□□□□□ -1.6
RARAP10276 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.05□□□□□ -1.6
RARAP10276 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RARAP10276 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RARAP10276 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RARAP10276 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.05□□□□□ -1.6
RARAP10276 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RARAP10276 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RARAP10276 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.04□□□□□ -1.6
RARAP10276 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RARAP10276 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
RARAP10276 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RARAP10276 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RARAP10276 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
RARAP10276 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RARAP10276 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RARAP10276 RNU6-1249P-201ENST00000363237 111 ntBASIC5.04□□□□□ -1.6
RARAP10276 Y_RNA.237-201ENST00000364439 102 ntBASIC5.04□□□□□ -1.6
RARAP10276 Y_RNA.274-201ENST00000364714 101 ntBASIC5.04□□□□□ -1.6
RARAP10276 RNU6-708P-201ENST00000384217 107 ntBASIC5.04□□□□□ -1.6
RARAP10276 RNU6-1179P-201ENST00000384667 107 ntBASIC5.04□□□□□ -1.6
RARAP10276 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RARAP10276 RNA5SP36-201ENST00000410197 133 ntBASIC5.04□□□□□ -1.6
RARAP10276 RNU4-34P-201ENST00000410431 124 ntBASIC5.04□□□□□ -1.6
RARAP10276 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.04□□□□□ -1.6
RARAP10276 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.6
RARAP10276 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.04□□□□□ -1.6
RARAP10276 snoU13.3-201ENST00000459441 104 ntBASIC5.04□□□□□ -1.6
RARAP10276 AC091153.1-201ENST00000466297 402 ntBASIC5.04□□□□□ -1.6
RARAP10276 AC133134.1-201ENST00000466800 359 ntBASIC5.04□□□□□ -1.6
RARAP10276 RNU1-86P-201ENST00000516108 154 ntBASIC5.04□□□□□ -1.6
RARAP10276 RNU1-107P-201ENST00000516617 154 ntBASIC5.04□□□□□ -1.6
RARAP10276 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.04□□□□□ -1.6
RARAP10276 AC126177.3-201ENST00000551839 688 ntBASIC5.04□□□□□ -1.6
RARAP10276 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.04□□□□□ -1.6
RARAP10276 RN7SL176P-201ENST00000580352 264 ntBASIC5.04□□□□□ -1.6
RARAP10276 RMST_4.1-201ENST00000616886 107 ntBASIC5.04□□□□□ -1.6
RARAP10276 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.04□□□□□ -1.6
RARAP10276 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RARAP10276 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RARAP10276 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RARAP10276 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.04□□□□□ -1.6
RARAP10276 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RARAP10276 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RARAP10276 AP000560.1-201ENST00000624150 1937 ntBASIC5.03□□□□□ -1.6
RARAP10276 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.03□□□□□ -1.6
RARAP10276 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RARAP10276 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RARAP10276 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.03□□□□□ -1.6
RARAP10276 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RARAP10276 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.03□□□□□ -1.6
RARAP10276 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.03□□□□□ -1.6
RARAP10276 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RARAP10276 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.03□□□□□ -1.6
RARAP10276 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RARAP10276 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RARAP10276 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RARAP10276 RNA5SP507-201ENST00000363603 121 ntBASIC5.03□□□□□ -1.6
RARAP10276 RNY1-201ENST00000364228 113 ntBASIC5.03□□□□□ -1.6
RARAP10276 RNU6-1317P-201ENST00000364582 104 ntBASIC5.03□□□□□ -1.6
RARAP10276 Y_RNA.270-201ENST00000364693 104 ntBASIC5.03□□□□□ -1.6
RARAP10276 RNU6-76P-201ENST00000384060 104 ntBASIC5.03□□□□□ -1.6
RARAP10276 SNORD96B-201ENST00000386148 79 ntBASIC5.03□□□□□ -1.6
RARAP10276 RNU6-700P-201ENST00000391043 107 ntBASIC5.03□□□□□ -1.6
RARAP10276 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RARAP10276 RN7SKP213-201ENST00000410746 298 ntBASIC5.03□□□□□ -1.6
RARAP10276 RPL23AP25-201ENST00000430973 463 ntBASIC5.03□□□□□ -1.6
RARAP10276 AL159987.2-201ENST00000432754 307 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms