Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 AC008521.1-201ENST00000587471 187 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 AC125232.2-201ENST00000592457 143 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 AC098479.1-201ENST00000609225 154 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 AC015967.1-201ENST00000619893 476 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 AC112484.5-201ENST00000624189 228 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 MIR4275-201ENST00000636486 87 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 MTND5P7-201ENST00000413558 1798 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 AC233263.6-201ENST00000631132 1963 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 UBBP2-201ENST00000376781 231 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 MT-TW-201ENST00000387382 68 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 MIR670-201ENST00000390142 98 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 RNU6-882P-201ENST00000391025 103 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 RNA5SP171-201ENST00000391071 115 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 AC007738.1-201ENST00000413892 348 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 RPS12P23-201ENST00000419579 400 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 AL117339.2-201ENST00000430475 180 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 RPL23AP52-201ENST00000439311 478 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 OSTCP8-201ENST00000445117 448 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 FABP5P13-201ENST00000452144 328 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 RN7SL132P-201ENST00000478131 296 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 AC012158.1-204ENST00000483430 465 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 AL132838.2-201ENST00000492041 314 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 AC022493.2-201ENST00000506122 481 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 AC021146.3-201ENST00000511911 260 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 AL121603.1-201ENST00000553815 142 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 AL359219.2-201ENST00000555184 348 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 HMGN2P28-201ENST00000606102 262 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 AL021879.1-201ENST00000611756 288 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 ATP5A1P2-202ENST00000616464 443 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 AC006133.1-201ENST00000617106 264 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 MIR8059-201ENST00000620427 81 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 AC010615.1-201ENST00000594254 1764 ntBASIC5.93□□□□□ -1.46
CSB-PGBD3P0DP91 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 AC103710.2-202ENST00000641454 2853 ntBASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 AC022893.2-201ENST00000564832 3296 ntBASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 SNORA62.3-201ENST00000365110 153 ntBASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 MIR554-201ENST00000384874 96 ntBASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 RPL7AP73-201ENST00000413490 353 ntBASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 AL139095.3-201ENST00000419672 1203 ntBASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 EIF4HP2-201ENST00000424380 563 ntBASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 SDAD1P3-201ENST00000427380 333 ntBASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 RPS15AP10-201ENST00000432472 382 ntBASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 HMGB3P30-201ENST00000457863 606 ntBASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 SNORD127-201ENST00000458892 86 ntBASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 RN7SL542P-201ENST00000467147 294 ntBASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 AC104472.2-201ENST00000469035 601 ntBASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 SNORA67.7-201ENST00000516664 135 ntBASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 RNU6-685P-201ENST00000517088 95 ntBASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 RNU1-45P-201ENST00000517191 141 ntBASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 OR4H12P-201ENST00000556269 907 ntBASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 AC007998.5-201ENST00000622938 237 ntBASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CSB-PGBD3P0DP91 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 Y_RNA.461-201ENST00000384263 103 ntBASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 RPL21P1-201ENST00000399532 476 ntBASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 SNORA11F-201ENST00000408237 128 ntBASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 AC243428.1-201ENST00000421099 264 ntBASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 PGBD4P6-201ENST00000421501 610 ntBASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 HMGN2P27-201ENST00000427352 270 ntBASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 RPL7P2-201ENST00000427639 268 ntBASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 RPL21P112-201ENST00000434403 463 ntBASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 RPS15AP27-201ENST00000449183 343 ntBASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 SCARNA18-201ENST00000459004 134 ntBASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 AP002812.1-201ENST00000495378 474 ntBASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 AC008958.1-201ENST00000511047 682 ntBASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 TBCAP3-201ENST00000512475 312 ntBASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 SCARNA16.2-201ENST00000516520 172 ntBASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 RNA5SP384-201ENST00000516615 116 ntBASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 RRN3P3-201ENST00000549207 578 ntBASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms