Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AL596327.1-201ENST00000603629 213 ntBASIC2.8□□□□□ -1.96
CHRNA1P02708 AL592221.1-201ENST00000605266 382 ntBASIC2.8□□□□□ -1.96
CHRNA1P02708 AC107952.2-201ENST00000606048 486 ntBASIC2.8□□□□□ -1.96
CHRNA1P02708 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.8□□□□□ -1.96
CHRNA1P02708 AC023510.2-201ENST00000622162 746 ntBASIC2.8□□□□□ -1.96
CHRNA1P02708 AC073308.1-201ENST00000623696 305 ntBASIC2.8□□□□□ -1.96
CHRNA1P02708 CR381653.2-201ENST00000624041 768 ntBASIC2.8□□□□□ -1.96
CHRNA1P02708 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CHRNA1P02708 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CHRNA1P02708 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CHRNA1P02708 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CHRNA1P02708 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.79□□□□□ -1.96
CHRNA1P02708 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CHRNA1P02708 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CHRNA1P02708 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CHRNA1P02708 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CHRNA1P02708 RNU6-157P-201ENST00000383957 107 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 Y_RNA.548-201ENST00000384656 105 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 MIR627-201ENST00000384979 97 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 U3.20-201ENST00000390909 217 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 MTND1P21-201ENST00000412991 285 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.79□□□□□ -1.96
CHRNA1P02708 NPM1P11-201ENST00000417106 855 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 MTCO2P17-201ENST00000424336 677 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.79□□□□□ -1.96
CHRNA1P02708 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.79□□□□□ -1.96
CHRNA1P02708 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.79□□□□□ -1.96
CHRNA1P02708 Z73417.1-201ENST00000447373 778 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.79□□□□□ -1.96
CHRNA1P02708 MTND4LP3-201ENST00000468320 276 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 AC034222.1-201ENST00000494052 532 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 ANXA2P1-201ENST00000505539 926 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.79□□□□□ -1.96
CHRNA1P02708 MTCYBP43-201ENST00000513621 740 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.79□□□□□ -1.96
CHRNA1P02708 RN7SKP40-201ENST00000517211 242 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 RNA5SP291-201ENST00000517222 105 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 AP003497.1-201ENST00000528472 562 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.79□□□□□ -1.96
CHRNA1P02708 DUXAP1-201ENST00000556632 463 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 AC087465.1-201ENST00000560574 245 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.79□□□□□ -1.96
CHRNA1P02708 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.79□□□□□ -1.96
CHRNA1P02708 AL357094.1-201ENST00000603845 844 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 AL031281.1-201ENST00000604049 488 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 AC013553.2-201ENST00000604244 589 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 AC112220.3-201ENST00000605502 502 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 RNU6-88P-201ENST00000606801 100 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.79□□□□□ -1.96
CHRNA1P02708 AL359198.2-201ENST00000611836 194 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 AL139418.1-201ENST00000613613 177 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 AC090132.2-201ENST00000615881 347 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 AL136981.2-201ENST00000617319 734 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 AL603758.1-201ENST00000618654 241 ntBASIC2.79□□□□□ -1.96
CHRNA1P02708 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.79□□□□□ -1.96
CHRNA1P02708 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.79□□□□□ -1.96
CHRNA1P02708 ZNF658B-202ENST00000615961 3375 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.78□□□□□ -1.96
CHRNA1P02708 MAPK10-266ENST00000641066 6555 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CHRNA1P02708 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.78□□□□□ -1.96
CHRNA1P02708 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CHRNA1P02708 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CHRNA1P02708 RNU6-462P-201ENST00000362659 105 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 RNU6-432P-201ENST00000384196 109 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 RNU6-198P-201ENST00000384258 104 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CHRNA1P02708 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.78□□□□□ -1.96
CHRNA1P02708 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.78□□□□□ -1.96
CHRNA1P02708 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.78□□□□□ -1.96
CHRNA1P02708 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.78□□□□□ -1.96
CHRNA1P02708 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.78□□□□□ -1.96
CHRNA1P02708 AL591719.1-201ENST00000444669 744 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 AL513124.1-201ENST00000450410 614 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 RPL23AP35-201ENST00000451906 501 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 AC008481.1-201ENST00000463278 396 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 RPL9P33-201ENST00000484311 566 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 HMGB1P36-201ENST00000487709 576 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.78□□□□□ -1.96
CHRNA1P02708 AC034244.1-201ENST00000507687 207 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 RNU6-1282P-201ENST00000516735 96 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.78□□□□□ -1.96
CHRNA1P02708 MTCO1P47-201ENST00000523889 1271 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.78□□□□□ -1.96
CHRNA1P02708 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.78□□□□□ -1.96
CHRNA1P02708 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.78□□□□□ -1.96
CHRNA1P02708 AL391001.1-201ENST00000602747 715 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 AC068313.1-201ENST00000604028 1008 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 AC025588.2-201ENST00000604851 466 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 AL136363.1-201ENST00000605349 337 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 TUSC7.1-201ENST00000610969 165 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 AC004852.3-201ENST00000614131 326 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 AC013476.2-201ENST00000614456 459 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 AL607023.1-201ENST00000620045 248 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 AC019226.1-201ENST00000625666 515 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 AC110079.1-202ENST00000635213 138 ntBASIC2.78□□□□□ -1.96
CHRNA1P02708 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.78□□□□□ -1.96
CHRNA1P02708 AL049641.1-201ENST00000441055 1948 ntBASIC2.78□□□□□ -1.97
CHRNA1P02708 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CHRNA1P02708 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms