Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 ARL2BPP2-201ENST00000550907 489 ntBASIC3.5□□□□□ -1.85
RTN3O95197 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.5□□□□□ -1.85
RTN3O95197 RPS3AP4-201ENST00000555161 764 ntBASIC3.5□□□□□ -1.85
RTN3O95197 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.5□□□□□ -1.85
RTN3O95197 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.5□□□□□ -1.85
RTN3O95197 AC005951.1-201ENST00000576706 485 ntBASIC3.5□□□□□ -1.85
RTN3O95197 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.5□□□□□ -1.85
RTN3O95197 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.5□□□□□ -1.85
RTN3O95197 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.5□□□□□ -1.85
RTN3O95197 AL451064.1-201ENST00000607718 471 ntBASIC3.5□□□□□ -1.85
RTN3O95197 AC091304.9-201ENST00000612091 226 ntBASIC3.5□□□□□ -1.85
RTN3O95197 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.5□□□□□ -1.85
RTN3O95197 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.5□□□□□ -1.85
RTN3O95197 AP001506.1-201ENST00000615444 211 ntBASIC3.5□□□□□ -1.85
RTN3O95197 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.5□□□□□ -1.85
RTN3O95197 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RTN3O95197 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.5□□□□□ -1.85
RTN3O95197 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
RTN3O95197 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
RTN3O95197 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RTN3O95197 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RTN3O95197 RNU5E-1-201ENST00000362477 120 ntBASIC3.49□□□□□ -1.85
RTN3O95197 RNA5SP383-201ENST00000362934 120 ntBASIC3.49□□□□□ -1.85
RTN3O95197 SNORA14A-201ENST00000364773 135 ntBASIC3.49□□□□□ -1.85
RTN3O95197 RNA5SP252-201ENST00000391131 119 ntBASIC3.49□□□□□ -1.85
RTN3O95197 RNU1-101P-201ENST00000391171 127 ntBASIC3.49□□□□□ -1.85
RTN3O95197 RPL23AP32-201ENST00000395315 459 ntBASIC3.49□□□□□ -1.85
RTN3O95197 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RTN3O95197 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.49□□□□□ -1.85
RTN3O95197 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.49□□□□□ -1.85
RTN3O95197 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.49□□□□□ -1.85
RTN3O95197 RPL23AP82-202ENST00000427528 469 ntBASIC3.49□□□□□ -1.85
RTN3O95197 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.49□□□□□ -1.85
RTN3O95197 SNRPGP6-201ENST00000451124 220 ntBASIC3.49□□□□□ -1.85
RTN3O95197 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.49□□□□□ -1.85
RTN3O95197 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.49□□□□□ -1.85
RTN3O95197 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.49□□□□□ -1.85
RTN3O95197 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.49□□□□□ -1.85
RTN3O95197 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.49□□□□□ -1.85
RTN3O95197 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.49□□□□□ -1.85
RTN3O95197 PIGPP4-201ENST00000584447 307 ntBASIC3.49□□□□□ -1.85
RTN3O95197 DUXAP4-201ENST00000603046 613 ntBASIC3.49□□□□□ -1.85
RTN3O95197 SEPT7P9-203ENST00000604116 343 ntBASIC3.49□□□□□ -1.85
RTN3O95197 AL442067.2-201ENST00000614033 363 ntBASIC3.49□□□□□ -1.85
RTN3O95197 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
RTN3O95197 SNORD39.4-201ENST00000620099 78 ntBASIC3.49□□□□□ -1.85
RTN3O95197 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.49□□□□□ -1.85
RTN3O95197 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.49□□□□□ -1.85
RTN3O95197 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RTN3O95197 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
RTN3O95197 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.48□□□□□ -1.85
RTN3O95197 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RTN3O95197 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RTN3O95197 HSPE1P11-201ENST00000339579 310 ntBASIC3.48□□□□□ -1.85
RTN3O95197 RNU6-701P-201ENST00000384059 107 ntBASIC3.48□□□□□ -1.85
RTN3O95197 SNORD116-1-201ENST00000384335 95 ntBASIC3.48□□□□□ -1.85
RTN3O95197 AL031121.1-201ENST00000406553 254 ntBASIC3.48□□□□□ -1.85
RTN3O95197 RNU2-36P-201ENST00000410361 191 ntBASIC3.48□□□□□ -1.85
RTN3O95197 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.48□□□□□ -1.85
RTN3O95197 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
RTN3O95197 ZNF863P-201ENST00000426746 417 ntBASIC3.48□□□□□ -1.85
RTN3O95197 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.48□□□□□ -1.85
RTN3O95197 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.48□□□□□ -1.85
RTN3O95197 HMGB1P27-201ENST00000431429 603 ntBASIC3.48□□□□□ -1.85
RTN3O95197 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.48□□□□□ -1.85
RTN3O95197 USP9YP15-201ENST00000442391 422 ntBASIC3.48□□□□□ -1.85
RTN3O95197 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.48□□□□□ -1.85
RTN3O95197 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.48□□□□□ -1.85
RTN3O95197 AC010099.1-201ENST00000455434 375 ntBASIC3.48□□□□□ -1.85
RTN3O95197 RPL37P6-201ENST00000460682 294 ntBASIC3.48□□□□□ -1.85
RTN3O95197 CENPBD1P1-201ENST00000464061 469 ntBASIC3.48□□□□□ -1.85
RTN3O95197 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.48□□□□□ -1.85
RTN3O95197 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RTN3O95197 NDUFB4P2-201ENST00000509515 391 ntBASIC3.48□□□□□ -1.85
RTN3O95197 AC117532.1-201ENST00000514638 323 ntBASIC3.48□□□□□ -1.85
RTN3O95197 SNORA31.3-201ENST00000516029 96 ntBASIC3.48□□□□□ -1.85
RTN3O95197 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.48□□□□□ -1.85
RTN3O95197 RNU6-928P-201ENST00000516876 104 ntBASIC3.48□□□□□ -1.85
RTN3O95197 RNU2-46P-201ENST00000517038 113 ntBASIC3.48□□□□□ -1.85
RTN3O95197 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.48□□□□□ -1.85
RTN3O95197 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.48□□□□□ -1.85
RTN3O95197 AC005476.1-201ENST00000554427 397 ntBASIC3.48□□□□□ -1.85
RTN3O95197 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.48□□□□□ -1.85
RTN3O95197 MIR5680-201ENST00000577577 84 ntBASIC3.48□□□□□ -1.85
RTN3O95197 AC011471.1-201ENST00000585766 187 ntBASIC3.48□□□□□ -1.85
RTN3O95197 AC073544.2-201ENST00000601155 540 ntBASIC3.48□□□□□ -1.85
RTN3O95197 AL162713.1-201ENST00000604480 262 ntBASIC3.48□□□□□ -1.85
RTN3O95197 AC135507.1-201ENST00000607214 561 ntBASIC3.48□□□□□ -1.85
RTN3O95197 AC004832.5-201ENST00000608677 401 ntBASIC3.48□□□□□ -1.85
RTN3O95197 AL157817.1-201ENST00000614264 790 ntBASIC3.48□□□□□ -1.85
RTN3O95197 AC034102.8-201ENST00000615146 484 ntBASIC3.48□□□□□ -1.85
RTN3O95197 MIR7112-201ENST00000616126 65 ntBASIC3.48□□□□□ -1.85
RTN3O95197 AC073308.1-201ENST00000623696 305 ntBASIC3.48□□□□□ -1.85
RTN3O95197 MIR3651-201ENST00000630427 90 ntBASIC3.48□□□□□ -1.85
RTN3O95197 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.48□□□□□ -1.85
RTN3O95197 AL137003.2-201ENST00000606924 2538 ntBASIC3.48□□□□□ -1.85
RTN3O95197 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RTN3O95197 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RTN3O95197 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.48□□□□□ -1.85
RTN3O95197 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms