Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 Y_RNA.197-201ENST00000364004 102 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 Y_RNA.216-201ENST00000364205 93 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 RNU6-266P-201ENST00000364225 107 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 SNORD66.1-201ENST00000391230 76 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.08□□□□□ -1.6
PRPF40AO75400 AC063979.1-201ENST00000415539 377 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 TOMM22P1-201ENST00000418578 312 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 AL592045.1-201ENST00000429867 352 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.08□□□□□ -1.6
PRPF40AO75400 HSFY6P-201ENST00000445573 403 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 snoU13.24-201ENST00000458998 104 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 AC010326.1-201ENST00000462726 602 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 AP000926.1-201ENST00000479573 241 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 APOOP4-201ENST00000513530 597 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 Y_RNA.711-201ENST00000516993 102 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.08□□□□□ -1.6
PRPF40AO75400 AC069113.1-201ENST00000517763 267 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.08□□□□□ -1.6
PRPF40AO75400 HIGD1AP5-201ENST00000529959 259 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 AC025423.5-201ENST00000550230 219 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 AC026371.1-201ENST00000551867 419 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.08□□□□□ -1.6
PRPF40AO75400 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.08□□□□□ -1.6
PRPF40AO75400 AC002044.1-201ENST00000606707 158 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 AC139713.2-214ENST00000642059 1811 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF40AO75400 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.08□□□□□ -1.6
PRPF40AO75400 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PRPF40AO75400 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PRPF40AO75400 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF40AO75400 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF40AO75400 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF40AO75400 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF40AO75400 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF40AO75400 RNU6-1303P-201ENST00000364841 107 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 Y_RNA.534-201ENST00000384599 112 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PRPF40AO75400 AC245054.2-201ENST00000415639 319 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 HSPD1P21-201ENST00000436541 245 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 AL359672.1-201ENST00000442302 409 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 RPS24P6-201ENST00000452670 400 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 snoU13.4-201ENST00000458916 104 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 RN7SL354P-201ENST00000469282 294 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 RPL12P20-201ENST00000475538 479 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 AL163540.1-201ENST00000485382 386 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 AC026979.1-201ENST00000492525 396 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 HMGB1P22-201ENST00000505315 124 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF40AO75400 AC009901.1-201ENST00000506703 541 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 AL359273.1-201ENST00000510918 627 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 RNA5SP497-201ENST00000516081 97 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 MED28P6-201ENST00000558776 231 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.07□□□□□ -1.6
PRPF40AO75400 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.07□□□□□ -1.6
PRPF40AO75400 MIR3921-201ENST00000577308 85 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 AC234771.5-201ENST00000600161 514 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 AC020634.1-201ENST00000608701 549 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 PISRT1.1-201ENST00000616930 107 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 AP000346.3-201ENST00000622821 210 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 AL669831.3-213ENST00000636676 183 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 Z99571.1-201ENST00000636677 394 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.07□□□□□ -1.6
PRPF40AO75400 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
PRPF40AO75400 AC006971.1-201ENST00000407916 4486 ntBASIC5.07□□□□□ -1.6
PRPF40AO75400 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.06□□□□□ -1.6
PRPF40AO75400 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF40AO75400 RNU6-371P-201ENST00000364283 108 ntBASIC5.06□□□□□ -1.6
PRPF40AO75400 RNU6-512P-201ENST00000364438 103 ntBASIC5.06□□□□□ -1.6
PRPF40AO75400 SNORA71.2-201ENST00000364941 134 ntBASIC5.06□□□□□ -1.6
PRPF40AO75400 MIR659-201ENST00000384963 97 ntBASIC5.06□□□□□ -1.6
PRPF40AO75400 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PRPF40AO75400 RNU4-25P-201ENST00000410569 230 ntBASIC5.06□□□□□ -1.6
PRPF40AO75400 RN7SKP106-201ENST00000410832 272 ntBASIC5.06□□□□□ -1.6
PRPF40AO75400 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.06□□□□□ -1.6
PRPF40AO75400 ATG3P1-201ENST00000419507 911 ntBASIC5.06□□□□□ -1.6
PRPF40AO75400 AC073063.1-201ENST00000434352 607 ntBASIC5.06□□□□□ -1.6
PRPF40AO75400 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.06□□□□□ -1.6
PRPF40AO75400 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.06□□□□□ -1.6
PRPF40AO75400 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.06□□□□□ -1.6
PRPF40AO75400 HMGB3P22-202ENST00000451823 572 ntBASIC5.06□□□□□ -1.6
PRPF40AO75400 ELOCP24-201ENST00000456370 334 ntBASIC5.06□□□□□ -1.6
PRPF40AO75400 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.06□□□□□ -1.6
PRPF40AO75400 RN7SL459P-201ENST00000481078 302 ntBASIC5.06□□□□□ -1.6
PRPF40AO75400 AC116337.1-201ENST00000509680 687 ntBASIC5.06□□□□□ -1.6
PRPF40AO75400 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.06□□□□□ -1.6
PRPF40AO75400 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.06□□□□□ -1.6
PRPF40AO75400 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.06□□□□□ -1.6
PRPF40AO75400 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF40AO75400 AC016925.2-201ENST00000605108 242 ntBASIC5.06□□□□□ -1.6
PRPF40AO75400 AP002826.1-201ENST00000608835 315 ntBASIC5.06□□□□□ -1.6
PRPF40AO75400 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.06□□□□□ -1.6
PRPF40AO75400 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC5.06□□□□□ -1.6
PRPF40AO75400 MTND5P19-201ENST00000424872 1794 ntBASIC5.06□□□□□ -1.6
PRPF40AO75400 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF40AO75400 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF40AO75400 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF40AO75400 RNU6-1167P-201ENST00000363227 94 ntBASIC5.05□□□□□ -1.6
PRPF40AO75400 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms