Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SDR42E1P2-201ENST00000614861 481 ntBASIC4.96□□□□□ -1.62
SOX1O00570 MIR8059-201ENST00000620427 81 ntBASIC4.96□□□□□ -1.62
SOX1O00570 AL031601.2-202ENST00000622650 282 ntBASIC4.96□□□□□ -1.62
SOX1O00570 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX1O00570 AL672167.1-205ENST00000641112 3080 ntBASIC4.96□□□□□ -1.62
SOX1O00570 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX1O00570 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.96□□□□□ -1.62
SOX1O00570 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX1O00570 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
SOX1O00570 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX1O00570 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
SOX1O00570 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SOX1O00570 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SOX1O00570 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX1O00570 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.95□□□□□ -1.62
SOX1O00570 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX1O00570 AC073346.2-201ENST00000624724 2058 ntBASIC4.95□□□□□ -1.62
SOX1O00570 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SOX1O00570 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SOX1O00570 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SOX1O00570 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX1O00570 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SOX1O00570 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX1O00570 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX1O00570 Y_RNA.64-201ENST00000362845 102 ntBASIC4.95□□□□□ -1.62
SOX1O00570 RNY1P16-201ENST00000363063 111 ntBASIC4.95□□□□□ -1.62
SOX1O00570 Y_RNA.478-201ENST00000384358 107 ntBASIC4.95□□□□□ -1.62
SOX1O00570 RNU6-790P-201ENST00000384479 105 ntBASIC4.95□□□□□ -1.62
SOX1O00570 RNU6-1093P-201ENST00000391194 107 ntBASIC4.95□□□□□ -1.62
SOX1O00570 AL030996.1-201ENST00000411430 235 ntBASIC4.95□□□□□ -1.62
SOX1O00570 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX1O00570 PPP1R11P2-201ENST00000423543 382 ntBASIC4.95□□□□□ -1.62
SOX1O00570 COX6CP13-201ENST00000428703 226 ntBASIC4.95□□□□□ -1.62
SOX1O00570 AL353997.1-201ENST00000432936 108 ntBASIC4.95□□□□□ -1.62
SOX1O00570 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX1O00570 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX1O00570 FCF1P4-201ENST00000448326 183 ntBASIC4.95□□□□□ -1.62
SOX1O00570 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX1O00570 RPS27AP13-201ENST00000498403 237 ntBASIC4.95□□□□□ -1.62
SOX1O00570 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.95□□□□□ -1.62
SOX1O00570 ACA59.1-201ENST00000515966 143 ntBASIC4.95□□□□□ -1.62
SOX1O00570 SNORA40.15-201ENST00000516884 107 ntBASIC4.95□□□□□ -1.62
SOX1O00570 AC087369.1-201ENST00000520775 996 ntBASIC4.95□□□□□ -1.62
SOX1O00570 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.95□□□□□ -1.62
SOX1O00570 AC006600.1-201ENST00000572529 153 ntBASIC4.95□□□□□ -1.62
SOX1O00570 OR1M4P-201ENST00000589199 287 ntBASIC4.95□□□□□ -1.62
SOX1O00570 AC005344.1-201ENST00000613391 459 ntBASIC4.95□□□□□ -1.62
SOX1O00570 MIR6839-201ENST00000620425 113 ntBASIC4.95□□□□□ -1.62
SOX1O00570 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
SOX1O00570 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SOX1O00570 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX1O00570 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SOX1O00570 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
SOX1O00570 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SOX1O00570 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX1O00570 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
SOX1O00570 SMG1P6-201ENST00000532337 2930 ntBASIC4.94□□□□□ -1.62
SOX1O00570 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
SOX1O00570 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SOX1O00570 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SOX1O00570 RNU6-1155P-201ENST00000363554 107 ntBASIC4.94□□□□□ -1.62
SOX1O00570 AL445529.1-201ENST00000398713 389 ntBASIC4.94□□□□□ -1.62
SOX1O00570 RPL21P67-201ENST00000402896 478 ntBASIC4.94□□□□□ -1.62
SOX1O00570 HSPE1P8-201ENST00000406997 288 ntBASIC4.94□□□□□ -1.62
SOX1O00570 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.94□□□□□ -1.62
SOX1O00570 AL121871.1-201ENST00000443413 436 ntBASIC4.94□□□□□ -1.62
SOX1O00570 AL590664.1-201ENST00000448065 339 ntBASIC4.94□□□□□ -1.62
SOX1O00570 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.94□□□□□ -1.62
SOX1O00570 AC025465.3-201ENST00000510570 311 ntBASIC4.94□□□□□ -1.62
SOX1O00570 AC144568.1-201ENST00000520139 137 ntBASIC4.94□□□□□ -1.62
SOX1O00570 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.94□□□□□ -1.62
SOX1O00570 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.94□□□□□ -1.62
SOX1O00570 AL121772.2-201ENST00000614331 297 ntBASIC4.94□□□□□ -1.62
SOX1O00570 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.94□□□□□ -1.62
SOX1O00570 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.94□□□□□ -1.62
SOX1O00570 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.94□□□□□ -1.62
SOX1O00570 FAM91A3P-201ENST00000456826 2544 ntBASIC4.94□□□□□ -1.62
SOX1O00570 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.94□□□□□ -1.62
SOX1O00570 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.94□□□□□ -1.62
SOX1O00570 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SOX1O00570 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SOX1O00570 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SOX1O00570 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX1O00570 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX1O00570 MTND5P6-201ENST00000422338 1798 ntBASIC4.93□□□□□ -1.62
SOX1O00570 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.93□□□□□ -1.62
SOX1O00570 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
SOX1O00570 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SOX1O00570 AC005183.1-201ENST00000603687 1979 ntBASIC4.93□□□□□ -1.62
SOX1O00570 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX1O00570 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SOX1O00570 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX1O00570 Y_RNA.19-201ENST00000362462 99 ntBASIC4.93□□□□□ -1.62
SOX1O00570 Y_RNA.48-201ENST00000362710 103 ntBASIC4.93□□□□□ -1.62
SOX1O00570 RNU4-50P-201ENST00000364361 141 ntBASIC4.93□□□□□ -1.62
SOX1O00570 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.93□□□□□ -1.62
SOX1O00570 Y_RNA.477-201ENST00000384352 108 ntBASIC4.93□□□□□ -1.62
SOX1O00570 MIR625-201ENST00000385047 85 ntBASIC4.93□□□□□ -1.62
SOX1O00570 AL035079.1-201ENST00000405210 287 ntBASIC4.93□□□□□ -1.62
SOX1O00570 RPL21P65-201ENST00000406094 466 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms