Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC009063.1-201ENST00000563342 702 ntBASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 AL161729.4-201ENST00000604650 476 ntBASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 MTND4LP5-201ENST00000605152 292 ntBASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 MIR378J-201ENST00000611988 109 ntBASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 DUXAP10-204ENST00000612052 616 ntBASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 AC006338.1-201ENST00000618453 749 ntBASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 MIR7843-201ENST00000622274 79 ntBASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 AC087821.2-201ENST00000637086 450 ntBASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 AC006026.1-201ENST00000444025 1803 ntBASIC0.78□□□□□ -2.29
CHKB-CPT1BH3BT56 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 SNORA22-201ENST00000383907 134 ntBASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 SNORA22C-201ENST00000384614 134 ntBASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 AL355615.1-201ENST00000406187 641 ntBASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 RPP40P1-201ENST00000426762 456 ntBASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 MED14P1-201ENST00000430517 648 ntBASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 Z82210.1-201ENST00000440037 231 ntBASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 AC079448.1-201ENST00000449377 373 ntBASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 AC009220.1-201ENST00000451614 275 ntBASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 RPS3P1-201ENST00000456781 192 ntBASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 RPS27P23-201ENST00000487608 251 ntBASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 RPL38P4-201ENST00000502376 214 ntBASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 AC113192.3-201ENST00000529152 742 ntBASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 AP004247.1-201ENST00000531556 1289 ntBASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 AC009097.3-201ENST00000563557 1018 ntBASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 DNAJC19P3-201ENST00000594491 331 ntBASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 AC009974.1-201ENST00000608881 455 ntBASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 AC021755.4-201ENST00000616620 456 ntBASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 AC034229.5-201ENST00000624258 185 ntBASIC0.77□□□□□ -2.29
CHKB-CPT1BH3BT56 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AC005539.1-201ENST00000443768 1479 ntBASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 RNU6-386P-201ENST00000362650 107 ntBASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 RNU6-486P-201ENST00000363116 107 ntBASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 MIR135A2-201ENST00000384854 100 ntBASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 MIR141-201ENST00000384975 95 ntBASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 MIR618-201ENST00000385287 98 ntBASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 RNU4-53P-201ENST00000410828 140 ntBASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AL135786.1-201ENST00000415892 214 ntBASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AC008173.1-201ENST00000418901 264 ntBASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AC092436.1-201ENST00000506450 503 ntBASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 SCARNA15.2-201ENST00000516409 127 ntBASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 RNU6ATAC12P-201ENST00000516542 115 ntBASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 RRN3P3-201ENST00000549207 578 ntBASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AC124947.2-202ENST00000552735 133 ntBASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AC007151.1-201ENST00000572774 483 ntBASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 MIR4765-201ENST00000585007 77 ntBASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AC138473.1-201ENST00000605717 526 ntBASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AL050343.2-201ENST00000607338 280 ntBASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AC016542.1-201ENST00000608259 493 ntBASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 MIR6075-201ENST00000620782 95 ntBASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC0.76□□□□□ -2.29
CHKB-CPT1BH3BT56 MTND5P6-201ENST00000422338 1798 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 GNG5P1-201ENST00000255500 204 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 CBX3P1-201ENST00000325243 554 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 AC062016.1-201ENST00000355719 319 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 RNA5SP515-201ENST00000364570 118 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 RNU6-203P-201ENST00000384038 104 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 SNORA64-201ENST00000384674 134 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms