Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 AL356010.1-201ENST00000456364 102 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 RPL21P10-201ENST00000463521 490 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 MRPS17P3-201ENST00000465453 385 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 MTCO3P38-201ENST00000468910 766 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 AC083798.1-201ENST00000472671 131 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 RPL36AP51-201ENST00000487216 318 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 AL359273.1-201ENST00000510918 627 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 RNA5SP309-201ENST00000516670 106 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 SNORA70.18-201ENST00000516696 98 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 OR5B19P-201ENST00000531766 928 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 NCAPGP2-201ENST00000557911 754 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 AC067852.3-201ENST00000589177 561 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 BRDTP1-201ENST00000605735 677 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 AC007619.2-201ENST00000605743 379 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 MIR486-1-201ENST00000612171 68 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 AL356321.1-201ENST00000621360 228 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 MTND5P1-201ENST00000445440 1375 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 AC066616.2-201ENST00000559334 1481 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 AC116096.1-201ENST00000566804 2314 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 MTND5P17-201ENST00000418405 1603 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 AL137003.2-201ENST00000606924 2538 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 RNU6-1283P-201ENST00000365314 105 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 Y_RNA.453-201ENST00000384223 109 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 MIR490-201ENST00000384865 128 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 USP9YP27-201ENST00000418455 438 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 AP000907.1-201ENST00000428428 510 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 AC000111.3-201ENST00000433478 193 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 RBMX2P4-201ENST00000441256 376 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 DDX3P2-201ENST00000446138 111 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 AC006512.1-201ENST00000468816 291 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 FAM92A1P2-202ENST00000504766 877 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 SNORA31.3-201ENST00000516029 96 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 SNORA40.12-201ENST00000516329 111 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 AC109635.3-201ENST00000529536 185 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 OR5BN1P-201ENST00000532955 829 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 AC007458.1-201ENST00000542812 373 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 AC034105.3-201ENST00000565294 442 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 RPL23AP84-201ENST00000571193 464 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 SNORA59B-202ENST00000578183 701 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 MIR4775-201ENST00000581168 75 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 AP001029.3-201ENST00000588063 596 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 AC008752.3-201ENST00000588113 712 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 AC007687.1-201ENST00000602704 304 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 AP002826.1-201ENST00000608835 315 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 AC006023.2-201ENST00000609916 167 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 AC090132.2-201ENST00000615881 347 ntBASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.6□□□□□ -1.83
TBC1D3FA6NER0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TBC1D3FA6NER0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TBC1D3FA6NER0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TBC1D3FA6NER0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TBC1D3FA6NER0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
TBC1D3FA6NER0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TBC1D3FA6NER0 MIR423-201ENST00000362201 94 ntBASIC3.59□□□□□ -1.83
TBC1D3FA6NER0 SNORA62.1-201ENST00000364287 154 ntBASIC3.59□□□□□ -1.83
TBC1D3FA6NER0 RNU6-61P-201ENST00000365528 109 ntBASIC3.59□□□□□ -1.83
TBC1D3FA6NER0 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.59□□□□□ -1.83
TBC1D3FA6NER0 HMGN2P8-201ENST00000391458 268 ntBASIC3.59□□□□□ -1.83
TBC1D3FA6NER0 PTMAP5-201ENST00000393073 333 ntBASIC3.59□□□□□ -1.83
TBC1D3FA6NER0 HSPE1P26-201ENST00000405341 275 ntBASIC3.59□□□□□ -1.83
TBC1D3FA6NER0 Z98941.1-201ENST00000407764 100 ntBASIC3.59□□□□□ -1.83
TBC1D3FA6NER0 MIR1277-201ENST00000408536 78 ntBASIC3.59□□□□□ -1.83
TBC1D3FA6NER0 RNA5SP129-201ENST00000410276 118 ntBASIC3.59□□□□□ -1.83
TBC1D3FA6NER0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.59□□□□□ -1.83
TBC1D3FA6NER0 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.59□□□□□ -1.83
TBC1D3FA6NER0 AC091390.3-201ENST00000426478 338 ntBASIC3.59□□□□□ -1.83
TBC1D3FA6NER0 AC016691.1-201ENST00000441321 413 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms