Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RPL23AP82-202ENST00000427528 469 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 SEPT14P3-201ENST00000439401 183 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 CALM1P1-201ENST00000442082 433 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AL732372.2-207ENST00000445840 183 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 NFU1P2-201ENST00000448700 469 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 SEPT14P2-201ENST00000453405 183 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 RNU7-182P-201ENST00000459009 62 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 CENPBD1P1-201ENST00000464061 469 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 SEPT14P4-201ENST00000513445 186 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 GMPSP1-201ENST00000514075 579 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 NRON-201ENST00000517270 370 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 RNU6-840P-201ENST00000517275 65 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 FO082796.1-201ENST00000523795 183 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AC118273.2-201ENST00000532092 465 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 CBX3P5-201ENST00000552017 521 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AC034105.3-201ENST00000565294 442 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AC055876.1-202ENST00000567053 138 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 RPL23AP84-201ENST00000571193 464 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AC005951.2-201ENST00000576282 495 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AC008752.3-201ENST00000588113 712 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 VN1R85P-201ENST00000601587 426 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AC174048.1-201ENST00000603389 144 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AP001330.4-201ENST00000604350 154 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 uc_338.11-201ENST00000619132 160 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 C2orf27A-204ENST00000623058 969 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AC004972.1-201ENST00000623934 2209 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 MFSD8-233ENST00000641482 4860 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 Y_RNA.38-201ENST00000362617 102 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 RNU5A-1-201ENST00000362698 116 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 RNU6-179P-201ENST00000363350 107 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 Y_RNA.255-201ENST00000364581 97 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 RNU6-61P-201ENST00000365528 109 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 Y_RNA.381-201ENST00000365666 102 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 RNU6-701P-201ENST00000384059 107 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 SNORA24.1-201ENST00000384401 135 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 RN7SKP263-201ENST00000411194 309 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 CRYBB2P1-203ENST00000415709 538 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 CYP4F29P-201ENST00000420685 446 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 ATP5JP1-201ENST00000431631 322 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 GTF2IP20-201ENST00000431663 360 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 RPS6P12-201ENST00000432491 726 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 VDAC1P3-201ENST00000434069 851 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 TXNP1-201ENST00000441872 371 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 CACYBPP2-201ENST00000453625 678 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 RPS20P20-201ENST00000460498 340 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 RN7SL442P-201ENST00000473804 320 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 AL163973.1-201ENST00000484753 577 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 AC104619.4-201ENST00000510773 249 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 RN7SKP13-201ENST00000515933 244 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 OR5D17P-201ENST00000531492 978 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 MTCO3P24-201ENST00000572729 782 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 AL354950.2-201ENST00000617939 290 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 YWHAEP7-203ENST00000622054 312 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 AC007998.5-201ENST00000622938 237 ntBASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TCRBV7S3A2A0A539 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 RNU6-996P-201ENST00000365438 107 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 RNU6-877P-201ENST00000383868 107 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 RNU6-946P-201ENST00000383878 107 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 RNU6-14P-201ENST00000384630 106 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 RN7SKP140-201ENST00000411196 284 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 RNU6-387P-201ENST00000411331 105 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 SYF2P2-201ENST00000417620 583 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 AL451054.2-201ENST00000420896 202 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 AC093106.2-201ENST00000428212 385 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms