Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDN16Q9Y5I7 U6.114-201ENST00000636407 96 ntBASIC3.45□□□□□ -1.86
CLDN16Q9Y5I7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDN16Q9Y5I7 ZNF680P1-201ENST00000436625 1469 ntBASIC3.45□□□□□ -1.86
CLDN16Q9Y5I7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
CLDN16Q9Y5I7 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN16Q9Y5I7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN16Q9Y5I7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.45□□□□□ -1.86
CLDN16Q9Y5I7 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN16Q9Y5I7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 RNU6-179P-201ENST00000363350 107 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 SNORA62.1-201ENST00000364287 154 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 SNORA5A-201ENST00000384111 134 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 MIR554-201ENST00000384874 96 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 AC114491.1-201ENST00000416095 246 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 AC245054.1-201ENST00000420944 258 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 MTCYBP5-201ENST00000423752 1135 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 USP9YP18-201ENST00000425912 695 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 HMGB1P27-201ENST00000431429 603 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 AL139415.2-201ENST00000431968 163 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 HIGD1AP11-201ENST00000438361 280 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 AC020550.1-201ENST00000447385 163 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 SNORA84-201ENST00000459229 133 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 AL121769.1-201ENST00000469473 401 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 AC092989.1-201ENST00000481235 277 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 HSPD1P15-201ENST00000505573 1122 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 ARL4AP2-201ENST00000507378 601 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 RN7SKP209-201ENST00000516888 304 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 OR5AL2P-201ENST00000532185 920 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 AC025678.1-201ENST00000567861 338 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 AP000553.6-201ENST00000641242 118 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 AC110774.1-201ENST00000623567 2018 ntBASIC3.44□□□□□ -1.86
CLDN16Q9Y5I7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 RNU6-946P-201ENST00000383878 107 ntBASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 RPS4XP8-201ENST00000402039 771 ntBASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 AL591416.1-201ENST00000404015 867 ntBASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 MRPL50P2-201ENST00000416821 482 ntBASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 USP9YP27-201ENST00000418455 438 ntBASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 BTF3L4P3-201ENST00000418879 476 ntBASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 AL035423.1-201ENST00000420331 213 ntBASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 AL590383.1-201ENST00000428602 75 ntBASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 RNU7-63P-201ENST00000459054 62 ntBASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 RPL37P6-201ENST00000460682 294 ntBASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 RN7SL93P-201ENST00000463035 293 ntBASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 RNU6-1256P-201ENST00000516539 103 ntBASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 Y_RNA.693-201ENST00000516641 110 ntBASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 RANP9-201ENST00000519957 271 ntBASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 AP006587.4-201ENST00000526053 529 ntBASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 OR5AQ1P-201ENST00000527596 927 ntBASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 AP005205.1-201ENST00000563503 508 ntBASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN16Q9Y5I7 AC245389.1-201ENST00000605141 529 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms