Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 OR6C66P-201ENST00000414917 930 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 AL451054.2-201ENST00000420896 202 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 SNORA71B-202ENST00000439232 272 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 MTND3P16-201ENST00000452205 344 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 RNU7-180P-201ENST00000459240 63 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 AP000852.1-201ENST00000472460 573 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 PPIAP15-201ENST00000479662 484 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 AC117522.3-201ENST00000507974 584 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 RAC1P2-201ENST00000511164 579 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 AC010486.1-201ENST00000511793 424 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 AC046134.1-201ENST00000514454 666 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 SNORA31.9-201ENST00000516429 84 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 RN7SKP83-201ENST00000516512 178 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 RN7SKP60-201ENST00000516985 239 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 IGKV2D-23-201ENST00000518179 286 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 MRPL49P2-201ENST00000521066 465 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 BNIP3P6-201ENST00000549284 499 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 AP001330.4-201ENST00000604350 154 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 AC007619.2-201ENST00000605743 379 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 AC104260.1-201ENST00000616660 539 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 MIR492-201ENST00000638676 116 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 MTND4P14-201ENST00000435799 1354 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 USP8P1-201ENST00000494673 3183 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 MIR423-201ENST00000362201 94 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 RNU6-1287P-201ENST00000362914 107 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 SNORA51.2-201ENST00000364595 132 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 RNA5SP167-201ENST00000365461 116 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 RNU6-1060P-201ENST00000384664 107 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 SNORD37.1-201ENST00000390968 65 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 RAP1BP3-201ENST00000407180 549 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 RNU4-46P-201ENST00000410818 138 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 AL513331.1-201ENST00000411908 397 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 RPL7P46-201ENST00000425129 740 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 ZNF863P-201ENST00000426746 417 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 RPL7L1P10-201ENST00000427790 463 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 TXNP1-201ENST00000441872 371 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 CBWD4P-201ENST00000445695 655 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 PMCHL2-203ENST00000457791 237 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 SNRPFP3-201ENST00000457792 225 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 RNU6-953P-201ENST00000459154 107 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 AC008628.2-201ENST00000502605 298 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 AC114786.4-201ENST00000508771 728 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 AC114781.4-201ENST00000513707 639 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 RNA5SP208-201ENST00000516156 78 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 AC012409.4-201ENST00000612923 249 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 MTND4P12-201ENST00000498999 1377 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 AC006504.1-201ENST00000562493 3666 ntBASIC3.99□□□□□ -1.77
PCDHA3Q9Y5H8 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 HSPA8P1-201ENST00000425843 1833 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 Y_RNA.70-201ENST00000362886 110 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 Y_RNA.231-201ENST00000364358 102 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 RNU6-38P-201ENST00000384085 107 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 MIR514A1-201ENST00000385133 98 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 RNU6-332P-201ENST00000391193 108 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AL606923.1-201ENST00000406616 190 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 RPL30P2-201ENST00000414021 291 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AC002075.2-201ENST00000425207 252 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 RPL21P66-201ENST00000426566 466 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 USP9YP8-201ENST00000441913 500 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 RNU6-333P-201ENST00000459117 107 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AC103987.1-201ENST00000473394 348 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms