Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 SMG1P7-201ENST00000565246 2704 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 U3.7-201ENST00000363668 216 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 RNU6-643P-201ENST00000384018 107 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 RNU6-142P-201ENST00000384019 107 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 MTHFD2P2-201ENST00000407725 247 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 RN7SKP17-201ENST00000411242 351 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 RNU6-603P-201ENST00000411403 107 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 AC138623.1-201ENST00000418060 216 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 AL121914.1-201ENST00000450188 156 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 snoU109.2-201ENST00000459316 135 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 RPL31P13-201ENST00000484151 370 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 RN7SKP238-201ENST00000516483 249 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 RNA5SP271-201ENST00000516700 88 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 RNA5SP340-201ENST00000517132 107 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 AC027308.1-201ENST00000517993 110 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 CYCSP23-201ENST00000519781 313 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 ZNF192P1-203ENST00000565888 810 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 AC027229.1-201ENST00000583887 253 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 AC087783.2-201ENST00000605070 562 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 AC010999.1-201ENST00000611856 324 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 AC091932.3-201ENST00000624223 323 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 AL773545.4-201ENST00000637262 310 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 AL513478.4-201ENST00000641636 310 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 SAGE2P-201ENST00000420011 2126 ntBASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHGA4Q9Y5G9 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 RNU6-527P-201ENST00000363425 104 ntBASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 RNU1-49P-201ENST00000363468 159 ntBASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 SNORD8-201ENST00000363915 110 ntBASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 SNORA26.2-201ENST00000390922 122 ntBASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 AC008065.1-201ENST00000428525 348 ntBASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 RPL32P33-201ENST00000487023 394 ntBASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 AC139453.3-201ENST00000493276 369 ntBASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 RNU6-1007P-201ENST00000516586 107 ntBASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 AC016256.1-201ENST00000547971 354 ntBASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 AC018448.1-201ENST00000552843 316 ntBASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 IGBP1P1-201ENST00000554337 1009 ntBASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 AC074140.1-201ENST00000621617 208 ntBASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 SCARNA4-202ENST00000625402 129 ntBASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHGA4Q9Y5G9 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 SNORD115-8-201ENST00000363856 82 ntBASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 Y_RNA.251-201ENST00000364551 99 ntBASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 SNORD115-38-201ENST00000365037 82 ntBASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 Y_RNA.498-201ENST00000384460 102 ntBASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 RNU6-588P-201ENST00000410281 105 ntBASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 AL358075.3-201ENST00000426289 226 ntBASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 AL161636.2-201ENST00000445179 927 ntBASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 AL589765.3-201ENST00000446084 462 ntBASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 AL591623.2-201ENST00000449978 222 ntBASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 Y_RNA.757-201ENST00000578934 114 ntBASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 AC013791.1-201ENST00000616619 62 ntBASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 FAM91A3P-201ENST00000456826 2544 ntBASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 AC092692.1-201ENST00000623625 2595 ntBASIC5.97□□□□□ -1.45
PCDHGA4Q9Y5G9 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms