Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ASNSP3-201ENST00000451989 1306 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 AL161912.2-201ENST00000565707 3007 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 RNA5SP52-201ENST00000362448 134 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 RNA5SP124-201ENST00000362739 110 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 RNU6-39P-201ENST00000384344 107 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 MIR19A-201ENST00000384878 82 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 HMGN1P24-201ENST00000412282 298 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 RAB9AP3-201ENST00000412737 573 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 MTND3P8-201ENST00000412909 339 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 NCOR1P3-201ENST00000420479 303 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 MTCO2P12-201ENST00000427426 682 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 SAR1AP4-201ENST00000429225 591 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 HMGB1P37-201ENST00000439613 609 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 MTND4P19-201ENST00000446659 478 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 AC073415.1-201ENST00000449240 153 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 RAB9AP1-201ENST00000449393 573 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 MRPS17P3-201ENST00000465453 385 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 AC020893.1-201ENST00000502452 580 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 AC112206.3-201ENST00000514578 389 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 AC105417.1-201ENST00000514691 285 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 RNU6-277P-201ENST00000516272 106 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 SNORD27.1-201ENST00000516319 72 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 RNU6-352P-201ENST00000516908 107 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 RNU6-1314P-201ENST00000517139 104 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 OR5BN1P-201ENST00000532955 829 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 GNRHR2P1-201ENST00000555315 631 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 MIR3944-201ENST00000581277 108 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 AP001029.3-201ENST00000588063 596 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 AC024220.1-201ENST00000603675 484 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 AL590099.1-201ENST00000615276 138 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 AC244100.1-202ENST00000621554 382 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 AC012442.3-202ENST00000636742 206 ntBASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CTDP1Q9Y5B0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 U3.11-201ENST00000364476 212 ntBASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 MIR449B-201ENST00000384995 97 ntBASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 RNU6-278P-201ENST00000390945 109 ntBASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 RNU6-837P-201ENST00000391056 108 ntBASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 RN7SKP140-201ENST00000411196 284 ntBASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 AL591419.1-201ENST00000427423 339 ntBASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 COX7A2P2-201ENST00000505291 250 ntBASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 AC006499.6-201ENST00000511169 607 ntBASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 RNU4-29P-201ENST00000515943 174 ntBASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 RNA5SP164-201ENST00000516533 110 ntBASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 AC087499.8-201ENST00000578406 226 ntBASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 MIR4444-1-201ENST00000581696 74 ntBASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 MIR4444-2-201ENST00000584390 74 ntBASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 AC022432.1-201ENST00000595739 310 ntBASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 HMGN2P28-201ENST00000606102 262 ntBASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 AL034408.1-202ENST00000636088 415 ntBASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 AL773545.4-201ENST00000637262 310 ntBASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 AL513478.4-201ENST00000641636 310 ntBASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 ZNF285B-201ENST00000561698 1767 ntBASIC4.48□□□□□ -1.69
CTDP1Q9Y5B0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms