Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SPG7Q9UQ90 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.32□□□□□ -1.56
SPG7Q9UQ90 AC090774.1-201ENST00000435925 246 ntBASIC5.32□□□□□ -1.56
SPG7Q9UQ90 RAB9AP1-201ENST00000449393 573 ntBASIC5.32□□□□□ -1.56
SPG7Q9UQ90 Y_RNA.639-201ENST00000458981 102 ntBASIC5.32□□□□□ -1.56
SPG7Q9UQ90 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.32□□□□□ -1.56
SPG7Q9UQ90 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.32□□□□□ -1.56
SPG7Q9UQ90 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.32□□□□□ -1.56
SPG7Q9UQ90 RN7SKP24-201ENST00000515888 284 ntBASIC5.32□□□□□ -1.56
SPG7Q9UQ90 HMGB1P19-201ENST00000517578 577 ntBASIC5.32□□□□□ -1.56
SPG7Q9UQ90 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.32□□□□□ -1.56
SPG7Q9UQ90 AC091516.1-201ENST00000549191 703 ntBASIC5.32□□□□□ -1.56
SPG7Q9UQ90 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.32□□□□□ -1.56
SPG7Q9UQ90 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.32□□□□□ -1.56
SPG7Q9UQ90 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SPG7Q9UQ90 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SPG7Q9UQ90 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 LINC01109-201ENST00000603837 3081 ntBASIC5.31□□□□□ -1.56
SPG7Q9UQ90 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 Y_RNA.216-201ENST00000364205 93 ntBASIC5.31□□□□□ -1.56
SPG7Q9UQ90 MIR606-201ENST00000384851 96 ntBASIC5.31□□□□□ -1.56
SPG7Q9UQ90 RN7SKP158-201ENST00000410453 326 ntBASIC5.31□□□□□ -1.56
SPG7Q9UQ90 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 RPL23AP89-201ENST00000439324 255 ntBASIC5.31□□□□□ -1.56
SPG7Q9UQ90 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 RPL21P103-201ENST00000479921 488 ntBASIC5.31□□□□□ -1.56
SPG7Q9UQ90 HMGB3P15-201ENST00000507326 574 ntBASIC5.31□□□□□ -1.56
SPG7Q9UQ90 HIGD1AP13-201ENST00000509878 289 ntBASIC5.31□□□□□ -1.56
SPG7Q9UQ90 AC021146.3-201ENST00000511911 260 ntBASIC5.31□□□□□ -1.56
SPG7Q9UQ90 RNA5SP454-201ENST00000517231 127 ntBASIC5.31□□□□□ -1.56
SPG7Q9UQ90 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 CYCSP30-201ENST00000546447 172 ntBASIC5.31□□□□□ -1.56
SPG7Q9UQ90 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 RPL23AP87-202ENST00000573039 466 ntBASIC5.31□□□□□ -1.56
SPG7Q9UQ90 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 MIR3672-201ENST00000584290 82 ntBASIC5.31□□□□□ -1.56
SPG7Q9UQ90 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 AL670379.10-201ENST00000604330 253 ntBASIC5.31□□□□□ -1.56
SPG7Q9UQ90 AP001836.1-201ENST00000604675 523 ntBASIC5.31□□□□□ -1.56
SPG7Q9UQ90 AL670379.9-201ENST00000605428 253 ntBASIC5.31□□□□□ -1.56
SPG7Q9UQ90 AC040896.1-201ENST00000613819 479 ntBASIC5.31□□□□□ -1.56
SPG7Q9UQ90 AC103705.1-201ENST00000619013 241 ntBASIC5.31□□□□□ -1.56
SPG7Q9UQ90 AC007998.5-201ENST00000622938 237 ntBASIC5.31□□□□□ -1.56
SPG7Q9UQ90 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.31□□□□□ -1.56
SPG7Q9UQ90 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SPG7Q9UQ90 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.3□□□□□ -1.56
SPG7Q9UQ90 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SPG7Q9UQ90 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.3□□□□□ -1.56
SPG7Q9UQ90 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.3□□□□□ -1.56
SPG7Q9UQ90 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SPG7Q9UQ90 MIR30B-201ENST00000384850 88 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 MTCYBP4-201ENST00000401524 249 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 SNORA57.3-201ENST00000411095 141 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 BX682237.1-201ENST00000415016 335 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 AL139396.1-201ENST00000421137 167 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 PPP1R11P2-201ENST00000423543 382 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.3□□□□□ -1.56
SPG7Q9UQ90 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.3□□□□□ -1.56
SPG7Q9UQ90 AL121871.1-201ENST00000443413 436 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 NEFMP1-201ENST00000443423 1006 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.3□□□□□ -1.56
SPG7Q9UQ90 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.3□□□□□ -1.56
SPG7Q9UQ90 Y_RNA.631-201ENST00000459607 101 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 TRBV1-201ENST00000476502 284 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 RN7SL323P-201ENST00000494712 295 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.3□□□□□ -1.56
SPG7Q9UQ90 RNU7-143P-201ENST00000516781 65 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 COPS8P3-201ENST00000526024 482 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 AP006587.4-201ENST00000526053 529 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 APOOP3-201ENST00000536787 586 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 ELOCP31-201ENST00000540463 467 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 AC135001.1-201ENST00000544546 283 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 AC012182.1-201ENST00000570133 895 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.3□□□□□ -1.56
SPG7Q9UQ90 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SPG7Q9UQ90 ATP1B3P1-201ENST00000605365 821 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 AC124303.1-201ENST00000605703 360 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 AC007619.2-201ENST00000605743 379 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 SNORA51-201ENST00000606420 132 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 FP236240.3-201ENST00000623061 327 ntBASIC5.3□□□□□ -1.56
SPG7Q9UQ90 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SPG7Q9UQ90 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SPG7Q9UQ90 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SPG7Q9UQ90 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SPG7Q9UQ90 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms