Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 AC004817.4-201ENST00000602396 3625 ntBASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 AC006023.2-201ENST00000609916 167 ntBASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 U73479.1-201ENST00000618062 168 ntBASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 RAD17P1-201ENST00000418130 2042 ntBASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 AL136964.1-201ENST00000622038 2990 ntBASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 RNU6-774P-201ENST00000363238 107 ntBASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 Y_RNA.270-201ENST00000364693 104 ntBASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 RNU6-338P-201ENST00000383888 105 ntBASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 Y_RNA.416-201ENST00000384014 113 ntBASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 Y_RNA.462-201ENST00000384268 102 ntBASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 SAR1AP2-201ENST00000392696 594 ntBASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 MTCO3P19-201ENST00000415864 321 ntBASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 RPS11P1-201ENST00000451072 473 ntBASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 RPL7P5-201ENST00000471472 736 ntBASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 AC113155.1-201ENST00000511141 769 ntBASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 AC108738.1-201ENST00000603703 237 ntBASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 AC006133.1-201ENST00000617106 264 ntBASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 AL445567.2-201ENST00000618935 498 ntBASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 FP236240.3-201ENST00000623061 327 ntBASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 BCORP1-203ENST00000513194 5093 ntBASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 ZNF285B-201ENST00000561698 1767 ntBASIC5.88□□□□□ -1.47
ZC3H4Q9UPT8 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 Y_RNA.785-201ENST00000384290 109 ntBASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 SNORA70.10-201ENST00000384515 134 ntBASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 MIR578-201ENST00000384828 96 ntBASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 RPS27AP13-201ENST00000498403 237 ntBASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 RNU1-6P-201ENST00000516290 144 ntBASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 SNORA67.7-201ENST00000516664 135 ntBASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 AC027369.5-201ENST00000533838 755 ntBASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 MIR7853-201ENST00000584820 132 ntBASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 MIR548AC-201ENST00000585049 88 ntBASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 MIR6715B-201ENST00000637172 77 ntBASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ZC3H4Q9UPT8 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 U3.15-201ENST00000365398 212 ntBASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 Y_RNA.533-201ENST00000384596 114 ntBASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 MIR124-3-201ENST00000384866 87 ntBASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 AL513475.1-201ENST00000406602 315 ntBASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 MTATP6P29-201ENST00000415057 132 ntBASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 AL356387.2-201ENST00000422272 243 ntBASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 AL360271.2-201ENST00000447710 161 ntBASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 RPL29P29-201ENST00000448725 423 ntBASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 AC090804.1-201ENST00000448870 490 ntBASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 MED28P2-201ENST00000475771 317 ntBASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 RN7SKP258-201ENST00000517151 304 ntBASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 AP001781.1-201ENST00000530977 207 ntBASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 SNRPGP16-201ENST00000533275 226 ntBASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 RN7SL290P-201ENST00000578661 300 ntBASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 AC012669.1-201ENST00000603209 283 ntBASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 AC114781.5-201ENST00000615297 108 ntBASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 RNA5SP196-201ENST00000625967 102 ntBASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms