Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 MIR1182-201ENST00000408363 97 ntBASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 GPS2P1-201ENST00000411761 986 ntBASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 AC009127.1-201ENST00000467090 155 ntBASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 AP000870.1-201ENST00000472927 406 ntBASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 AC005176.2-201ENST00000596933 147 ntBASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 MIR6839-201ENST00000620425 113 ntBASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 RNU6-395P-201ENST00000365662 106 ntBASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 RNU11-201ENST00000387069 134 ntBASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 SNORA40.5-201ENST00000391061 128 ntBASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 U3.22-201ENST00000391120 215 ntBASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 COX6B1P7-201ENST00000430845 235 ntBASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 AL031737.1-201ENST00000450125 223 ntBASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 RN7SL214P-201ENST00000487317 265 ntBASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 AL360012.1-201ENST00000602813 131 ntBASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 RMST_6.1-201ENST00000611980 203 ntBASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM35Q9UPQ4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 RNU6-245P-201ENST00000384020 107 ntBASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 UBA52P6-201ENST00000399822 382 ntBASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 BPY2DP-201ENST00000422208 265 ntBASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 RPL21P6-201ENST00000479171 504 ntBASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 SUMO2P6-201ENST00000505273 288 ntBASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 RNU6-762P-201ENST00000517107 102 ntBASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 IGLVIV-53-201ENST00000520107 367 ntBASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 AC027369.5-201ENST00000533838 755 ntBASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 AC022441.3-201ENST00000605737 136 ntBASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM35Q9UPQ4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 SNORA17.1-201ENST00000362945 126 ntBASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 RNU6-729P-201ENST00000384399 107 ntBASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 RPL19P16-201ENST00000433839 588 ntBASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 RPS11P7-201ENST00000442125 465 ntBASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 AC096638.1-201ENST00000444678 216 ntBASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 RNU6-772P-201ENST00000516042 105 ntBASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 AL670379.3-201ENST00000605040 251 ntBASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM35Q9UPQ4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
TRIM35Q9UPQ4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms