Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTN3Q9P232 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
CNTN3Q9P232 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTN3Q9P232 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.1□□□□□ -1.59
CNTN3Q9P232 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTN3Q9P232 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CNTN3Q9P232 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNTN3Q9P232 Y_RNA.126-201ENST00000363382 111 ntBASIC5.09□□□□□ -1.59
CNTN3Q9P232 SNORD113.2-201ENST00000364166 89 ntBASIC5.09□□□□□ -1.59
CNTN3Q9P232 RNU6-472P-201ENST00000384299 107 ntBASIC5.09□□□□□ -1.59
CNTN3Q9P232 RNU6-790P-201ENST00000384479 105 ntBASIC5.09□□□□□ -1.59
CNTN3Q9P232 RNU6-882P-201ENST00000391025 103 ntBASIC5.09□□□□□ -1.59
CNTN3Q9P232 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.09□□□□□ -1.59
CNTN3Q9P232 RPL21P2-201ENST00000440049 481 ntBASIC5.09□□□□□ -1.59
CNTN3Q9P232 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.09□□□□□ -1.59
CNTN3Q9P232 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.09□□□□□ -1.59
CNTN3Q9P232 AL360271.2-201ENST00000447710 161 ntBASIC5.09□□□□□ -1.59
CNTN3Q9P232 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC5.09□□□□□ -1.59
CNTN3Q9P232 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.09□□□□□ -1.59
CNTN3Q9P232 RPL36AP41-201ENST00000493820 306 ntBASIC5.09□□□□□ -1.59
CNTN3Q9P232 VN1R104P-201ENST00000505115 1009 ntBASIC5.09□□□□□ -1.59
CNTN3Q9P232 MTND3P25-201ENST00000509243 135 ntBASIC5.09□□□□□ -1.59
CNTN3Q9P232 SNORA31.22-201ENST00000517204 135 ntBASIC5.09□□□□□ -1.59
CNTN3Q9P232 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.09□□□□□ -1.59
CNTN3Q9P232 IGHV3-76-201ENST00000522465 295 ntBASIC5.09□□□□□ -1.59
CNTN3Q9P232 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.09□□□□□ -1.59
CNTN3Q9P232 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.09□□□□□ -1.59
CNTN3Q9P232 SNORD84-203ENST00000584275 78 ntBASIC5.09□□□□□ -1.59
CNTN3Q9P232 AC008745.1-201ENST00000604064 271 ntBASIC5.09□□□□□ -1.59
CNTN3Q9P232 MTND4LP5-201ENST00000605152 292 ntBASIC5.09□□□□□ -1.59
CNTN3Q9P232 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.09□□□□□ -1.59
CNTN3Q9P232 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
CNTN3Q9P232 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNTN3Q9P232 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.09□□□□□ -1.6
CNTN3Q9P232 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
CNTN3Q9P232 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.09□□□□□ -1.6
CNTN3Q9P232 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CNTN3Q9P232 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CNTN3Q9P232 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
CNTN3Q9P232 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNTN3Q9P232 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CNTN3Q9P232 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CNTN3Q9P232 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CNTN3Q9P232 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.08□□□□□ -1.6
CNTN3Q9P232 AC125257.1-201ENST00000560400 2930 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNTN3Q9P232 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNTN3Q9P232 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CNTN3Q9P232 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CNTN3Q9P232 OR56A5-201ENST00000340110 738 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 RNA5SP52-201ENST00000362448 134 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 RNU4-42P-201ENST00000364738 142 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 Y_RNA.461-201ENST00000384263 103 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 Y_RNA.534-201ENST00000384599 112 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 RNA5SP332-201ENST00000391063 115 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 MIR548I3-201ENST00000408378 149 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 MIR548I1-201ENST00000408810 149 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 FAR2P2-201ENST00000413041 594 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 EIF4HP2-201ENST00000424380 563 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 SUMO1P2-201ENST00000452524 304 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.08□□□□□ -1.6
CNTN3Q9P232 MTCO3P8-201ENST00000453691 755 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.08□□□□□ -1.6
CNTN3Q9P232 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.08□□□□□ -1.6
CNTN3Q9P232 SNORD127-201ENST00000458892 86 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 AC006463.2-201ENST00000473326 348 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 AC008716.1-201ENST00000511084 513 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.08□□□□□ -1.6
CNTN3Q9P232 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CNTN3Q9P232 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.08□□□□□ -1.6
CNTN3Q9P232 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.08□□□□□ -1.6
CNTN3Q9P232 BNIP3P5-201ENST00000562290 498 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.08□□□□□ -1.6
CNTN3Q9P232 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.08□□□□□ -1.6
CNTN3Q9P232 AC078899.3-201ENST00000599065 212 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 AC068790.4-201ENST00000602474 263 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 AC034102.8-201ENST00000615146 484 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 AC138627.2-201ENST00000624202 601 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.08□□□□□ -1.6
CNTN3Q9P232 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNTN3Q9P232 AC008079.2-201ENST00000623543 20396 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 ZNF285B-201ENST00000561698 1767 ntBASIC5.08□□□□□ -1.6
CNTN3Q9P232 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.08□□□□□ -1.6
CNTN3Q9P232 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.08□□□□□ -1.6
CNTN3Q9P232 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CNTN3Q9P232 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.07□□□□□ -1.6
CNTN3Q9P232 AC233263.6-201ENST00000631132 1963 ntBASIC5.07□□□□□ -1.6
CNTN3Q9P232 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.07□□□□□ -1.6
CNTN3Q9P232 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CNTN3Q9P232 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.07□□□□□ -1.6
CNTN3Q9P232 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CNTN3Q9P232 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CNTN3Q9P232 RNY1P16-201ENST00000363063 111 ntBASIC5.07□□□□□ -1.6
CNTN3Q9P232 MIR578-201ENST00000384828 96 ntBASIC5.07□□□□□ -1.6
CNTN3Q9P232 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CNTN3Q9P232 AP000580.1-201ENST00000404439 358 ntBASIC5.07□□□□□ -1.6
CNTN3Q9P232 RNU2-64P-201ENST00000411315 191 ntBASIC5.07□□□□□ -1.6
CNTN3Q9P232 AC063979.1-201ENST00000415539 377 ntBASIC5.07□□□□□ -1.6
CNTN3Q9P232 AL353621.1-201ENST00000418219 243 ntBASIC5.07□□□□□ -1.6
CNTN3Q9P232 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 160.9 ms