Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 MTND4P16-201ENST00000466108 1367 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.89□□□□□ -1.95
RNF41Q9H4P4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RNF41Q9H4P4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RNF41Q9H4P4 Y_RNA.18-201ENST00000362461 102 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 RNU6-97P-201ENST00000363387 104 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 RNU6-660P-201ENST00000364566 109 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 RNU5A-2P-201ENST00000384337 116 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 SNORA41-201ENST00000384675 132 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AL049545.1-201ENST00000401856 572 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 RNU2-43P-201ENST00000410306 190 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 RNU4-72P-201ENST00000410754 173 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.89□□□□□ -1.95
RNF41Q9H4P4 RPL23AP39-201ENST00000415533 405 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 MTATP6P4-201ENST00000427725 675 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 MTND5P25-201ENST00000430499 799 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AC090774.1-201ENST00000435925 246 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AC004866.2-201ENST00000438285 481 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 THAP5P1-201ENST00000439089 262 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.89□□□□□ -1.95
RNF41Q9H4P4 RPL26P6-201ENST00000440913 438 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 PAXBP1P1-201ENST00000449315 447 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AL133217.1-201ENST00000450980 425 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 HMGN2P13-201ENST00000476476 274 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 MLLT10P2-201ENST00000506434 249 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 SNORA31.22-201ENST00000517204 135 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AP004247.1-201ENST00000531556 1289 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RNF41Q9H4P4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AC090616.2-202ENST00000584248 222 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AC060766.3-201ENST00000591442 263 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AP001429.1-201ENST00000602568 530 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AC011451.2-201ENST00000604303 598 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AC107214.2-201ENST00000608204 634 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AL359198.2-201ENST00000611836 194 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AC004223.4-201ENST00000612426 332 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AC079248.2-201ENST00000623779 326 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AC092192.1-201ENST00000633154 1018 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RNF41Q9H4P4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RNF41Q9H4P4 MAPK10-266ENST00000641066 6555 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 MTND5P33-201ENST00000571250 1450 ntBASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.89□□□□□ -1.95
RNF41Q9H4P4 AC006378.2-201ENST00000623178 2476 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RNF41Q9H4P4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.88□□□□□ -1.95
RNF41Q9H4P4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AC016717.2-201ENST00000609089 5141 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 RNU6-253P-201ENST00000384730 105 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RNF41Q9H4P4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.88□□□□□ -1.95
RNF41Q9H4P4 OR4K11P-201ENST00000431829 904 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 LARP1BP3-201ENST00000437229 869 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AL445567.1-201ENST00000439121 144 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AC098826.2-201ENST00000452011 651 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 RNU7-125P-201ENST00000458760 62 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 RPL36AP51-201ENST00000487216 318 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 CBX3P3-201ENST00000508108 532 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AC105914.1-201ENST00000511798 226 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AC022483.1-201ENST00000514020 567 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 RNU6-678P-201ENST00000516832 109 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.88□□□□□ -1.95
RNF41Q9H4P4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AC027176.1-201ENST00000560204 514 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.88□□□□□ -1.95
RNF41Q9H4P4 NIFKP6-201ENST00000598115 845 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AP000403.1-201ENST00000603349 851 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 MIR6130-201ENST00000619419 109 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AC091304.6-201ENST00000619761 202 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AC097520.1-201ENST00000624435 385 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.88□□□□□ -1.95
RNF41Q9H4P4 AL513185.3-201ENST00000433335 1300 ntBASIC2.88□□□□□ -1.95
RNF41Q9H4P4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RNF41Q9H4P4 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.87□□□□□ -1.95
RNF41Q9H4P4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.87□□□□□ -1.95
RNF41Q9H4P4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.87□□□□□ -1.95
RNF41Q9H4P4 RNU6-114P-201ENST00000384704 105 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AL354719.1-201ENST00000406535 843 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 RPS3AP24-201ENST00000407896 734 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.87□□□□□ -1.95
RNF41Q9H4P4 RPS6P15-201ENST00000431996 751 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AC098826.1-201ENST00000433943 471 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms