Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 U4atac.1-201ENST00000618345 95 ntBASIC2.41□□□□□ -2.02
CHMP4BQ9H444 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.41□□□□□ -2.02
CHMP4BQ9H444 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.02
CHMP4BQ9H444 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.4□□□□□ -2.03
CHMP4BQ9H444 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.03
CHMP4BQ9H444 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CHMP4BQ9H444 RNA5SP88-201ENST00000365560 109 ntBASIC2.4□□□□□ -2.03
CHMP4BQ9H444 RNU6-253P-201ENST00000384730 105 ntBASIC2.4□□□□□ -2.03
CHMP4BQ9H444 SNORD65C-201ENST00000390962 71 ntBASIC2.4□□□□□ -2.03
CHMP4BQ9H444 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.4□□□□□ -2.03
CHMP4BQ9H444 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.4□□□□□ -2.03
CHMP4BQ9H444 RPL31P63-201ENST00000422565 375 ntBASIC2.4□□□□□ -2.03
CHMP4BQ9H444 NDUFB4P7-201ENST00000423198 363 ntBASIC2.4□□□□□ -2.03
CHMP4BQ9H444 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.4□□□□□ -2.03
CHMP4BQ9H444 AC002542.1-201ENST00000440683 193 ntBASIC2.4□□□□□ -2.03
CHMP4BQ9H444 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CHMP4BQ9H444 DDX3P2-201ENST00000446138 111 ntBASIC2.4□□□□□ -2.03
CHMP4BQ9H444 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.4□□□□□ -2.03
CHMP4BQ9H444 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.4□□□□□ -2.03
CHMP4BQ9H444 MTAPP1-201ENST00000489154 819 ntBASIC2.4□□□□□ -2.03
CHMP4BQ9H444 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.4□□□□□ -2.03
CHMP4BQ9H444 RPL38P4-201ENST00000502376 214 ntBASIC2.4□□□□□ -2.03
CHMP4BQ9H444 HMGB3P17-201ENST00000504195 649 ntBASIC2.4□□□□□ -2.03
CHMP4BQ9H444 RNA5SP182-201ENST00000516064 82 ntBASIC2.4□□□□□ -2.03
CHMP4BQ9H444 SNORA31.23-201ENST00000517219 133 ntBASIC2.4□□□□□ -2.03
CHMP4BQ9H444 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.4□□□□□ -2.03
CHMP4BQ9H444 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.4□□□□□ -2.03
CHMP4BQ9H444 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.4□□□□□ -2.03
CHMP4BQ9H444 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.4□□□□□ -2.03
CHMP4BQ9H444 AC007038.2-201ENST00000608095 740 ntBASIC2.4□□□□□ -2.03
CHMP4BQ9H444 AC011330.2-201ENST00000621680 635 ntBASIC2.4□□□□□ -2.03
CHMP4BQ9H444 AC110994.2-201ENST00000635481 492 ntBASIC2.4□□□□□ -2.03
CHMP4BQ9H444 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CHMP4BQ9H444 U8.2-201ENST00000363156 134 ntBASIC2.39□□□□□ -2.03
CHMP4BQ9H444 AL136133.1-201ENST00000413694 376 ntBASIC2.39□□□□□ -2.03
CHMP4BQ9H444 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.39□□□□□ -2.03
CHMP4BQ9H444 AL451074.3-201ENST00000437709 472 ntBASIC2.39□□□□□ -2.03
CHMP4BQ9H444 BMI1P1-201ENST00000445879 941 ntBASIC2.39□□□□□ -2.03
CHMP4BQ9H444 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.39□□□□□ -2.03
CHMP4BQ9H444 MTCO1P48-201ENST00000448024 1096 ntBASIC2.39□□□□□ -2.03
CHMP4BQ9H444 PMCHL2-203ENST00000457791 237 ntBASIC2.39□□□□□ -2.03
CHMP4BQ9H444 KLF3P2-201ENST00000465138 268 ntBASIC2.39□□□□□ -2.03
CHMP4BQ9H444 AC092757.1-201ENST00000467293 467 ntBASIC2.39□□□□□ -2.03
CHMP4BQ9H444 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CHMP4BQ9H444 SUMO2P6-201ENST00000505273 288 ntBASIC2.39□□□□□ -2.03
CHMP4BQ9H444 ANXA2P1-201ENST00000505539 926 ntBASIC2.39□□□□□ -2.03
CHMP4BQ9H444 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.39□□□□□ -2.03
CHMP4BQ9H444 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.39□□□□□ -2.03
CHMP4BQ9H444 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.39□□□□□ -2.03
CHMP4BQ9H444 AC011611.5-201ENST00000552477 578 ntBASIC2.39□□□□□ -2.03
CHMP4BQ9H444 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.39□□□□□ -2.03
CHMP4BQ9H444 AC091544.4-201ENST00000555268 342 ntBASIC2.39□□□□□ -2.03
CHMP4BQ9H444 AC093510.2-201ENST00000562820 896 ntBASIC2.39□□□□□ -2.03
CHMP4BQ9H444 AC093519.1-201ENST00000566109 298 ntBASIC2.39□□□□□ -2.03
CHMP4BQ9H444 AC090897.2-201ENST00000581715 130 ntBASIC2.39□□□□□ -2.03
CHMP4BQ9H444 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.39□□□□□ -2.03
CHMP4BQ9H444 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CHMP4BQ9H444 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
CHMP4BQ9H444 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CHMP4BQ9H444 OR1L1-202ENST00000373686 1083 ntBASIC2.38□□□□□ -2.03
CHMP4BQ9H444 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CHMP4BQ9H444 AL356432.1-201ENST00000405809 419 ntBASIC2.38□□□□□ -2.03
CHMP4BQ9H444 RN7SKP158-201ENST00000410453 326 ntBASIC2.38□□□□□ -2.03
CHMP4BQ9H444 AL445183.3-201ENST00000414168 502 ntBASIC2.38□□□□□ -2.03
CHMP4BQ9H444 AC246680.2-201ENST00000422106 389 ntBASIC2.38□□□□□ -2.03
CHMP4BQ9H444 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.38□□□□□ -2.03
CHMP4BQ9H444 RPL32P14-201ENST00000463196 378 ntBASIC2.38□□□□□ -2.03
CHMP4BQ9H444 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.38□□□□□ -2.03
CHMP4BQ9H444 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.38□□□□□ -2.03
CHMP4BQ9H444 MIR892C-201ENST00000516410 77 ntBASIC2.38□□□□□ -2.03
CHMP4BQ9H444 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.38□□□□□ -2.03
CHMP4BQ9H444 HMGB1P1-201ENST00000522557 636 ntBASIC2.38□□□□□ -2.03
CHMP4BQ9H444 AC024224.1-201ENST00000538284 609 ntBASIC2.38□□□□□ -2.03
CHMP4BQ9H444 AC087465.1-201ENST00000560574 245 ntBASIC2.38□□□□□ -2.03
CHMP4BQ9H444 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.38□□□□□ -2.03
CHMP4BQ9H444 AL590099.1-201ENST00000615276 138 ntBASIC2.38□□□□□ -2.03
CHMP4BQ9H444 MTND5P29-201ENST00000458676 1807 ntBASIC2.38□□□□□ -2.03
CHMP4BQ9H444 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CHMP4BQ9H444 RNU5A-1-201ENST00000362698 116 ntBASIC2.37□□□□□ -2.03
CHMP4BQ9H444 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
CHMP4BQ9H444 RNU6-878P-201ENST00000384578 110 ntBASIC2.37□□□□□ -2.03
CHMP4BQ9H444 RNU6-883P-201ENST00000384597 107 ntBASIC2.37□□□□□ -2.03
CHMP4BQ9H444 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CHMP4BQ9H444 RNA5SP489-201ENST00000410986 109 ntBASIC2.37□□□□□ -2.03
CHMP4BQ9H444 AC008173.1-201ENST00000418901 264 ntBASIC2.37□□□□□ -2.03
CHMP4BQ9H444 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.37□□□□□ -2.03
CHMP4BQ9H444 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.37□□□□□ -2.03
CHMP4BQ9H444 TRIM60P13-201ENST00000432350 1283 ntBASIC2.37□□□□□ -2.03
CHMP4BQ9H444 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.37□□□□□ -2.03
CHMP4BQ9H444 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.37□□□□□ -2.03
CHMP4BQ9H444 MTND3P4-201ENST00000453537 303 ntBASIC2.37□□□□□ -2.03
CHMP4BQ9H444 RPL12P25-201ENST00000455592 494 ntBASIC2.37□□□□□ -2.03
CHMP4BQ9H444 CDC42P1-201ENST00000456658 548 ntBASIC2.37□□□□□ -2.03
CHMP4BQ9H444 RN7SL274P-201ENST00000492268 272 ntBASIC2.37□□□□□ -2.03
CHMP4BQ9H444 COX7A2P2-201ENST00000505291 250 ntBASIC2.37□□□□□ -2.03
CHMP4BQ9H444 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.37□□□□□ -2.03
CHMP4BQ9H444 SCARNA17.1-201ENST00000516211 143 ntBASIC2.37□□□□□ -2.03
CHMP4BQ9H444 SCARNA17.2-201ENST00000516334 143 ntBASIC2.37□□□□□ -2.03
CHMP4BQ9H444 RNA5SP135-201ENST00000517019 125 ntBASIC2.37□□□□□ -2.03
CHMP4BQ9H444 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms